Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
HCN1O60741 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
HCN1O60741 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCN1O60741 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCN1O60741 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCN1O60741 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.52■■□□□ 1.36
HCN1O60741 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L13-201ENST00000554103 1267 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L15-201ENST00000611059 1267 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L23-201ENST00000615195 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L24-201ENST00000617576 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L22-201ENST00000618238 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L20-201ENST00000619712 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L21-201ENST00000622058 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L10-201ENST00000622460 1267 ntBASIC23.52■■□□□ 1.36
HCN1O60741 DUX4L25-201ENST00000624915 1269 ntBASIC23.52■■□□□ 1.36
HCN1O60741 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
HCN1O60741 LINC00273-201ENST00000539813 1452 ntBASIC23.51■■□□□ 1.35
HCN1O60741 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.51■■□□□ 1.35
HCN1O60741 MIR4449-201ENST00000578365 66 ntBASIC23.51■■□□□ 1.35
HCN1O60741 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
HCN1O60741 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
HCN1O60741 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
HCN1O60741 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
HCN1O60741 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HCN1O60741 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
HCN1O60741 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.5■■□□□ 1.35
HCN1O60741 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
HCN1O60741 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HCN1O60741 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HCN1O60741 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HCN1O60741 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
HCN1O60741 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
HCN1O60741 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.48■■□□□ 1.35
HCN1O60741 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
HCN1O60741 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
HCN1O60741 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.48■■□□□ 1.35
HCN1O60741 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HCN1O60741 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HCN1O60741 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
HCN1O60741 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HCN1O60741 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HCN1O60741 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.46■■□□□ 1.35
HCN1O60741 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.46■■□□□ 1.35
HCN1O60741 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.45■■□□□ 1.35
HCN1O60741 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
HCN1O60741 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HCN1O60741 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HCN1O60741 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
HCN1O60741 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
HCN1O60741 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
HCN1O60741 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HCN1O60741 AP004833.2-201ENST00000532228 1454 ntBASIC23.43■■□□□ 1.34
HCN1O60741 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
HCN1O60741 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HCN1O60741 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.42■■□□□ 1.34
HCN1O60741 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.42■■□□□ 1.34
HCN1O60741 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HCN1O60741 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
HCN1O60741 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.41■■□□□ 1.34
HCN1O60741 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.41■■□□□ 1.34
HCN1O60741 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
HCN1O60741 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
HCN1O60741 AC127502.1-201ENST00000399971 1502 ntBASIC23.4■■□□□ 1.34
HCN1O60741 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
HCN1O60741 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HCN1O60741 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
HCN1O60741 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
HCN1O60741 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HCN1O60741 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.39■■□□□ 1.33
HCN1O60741 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCN1O60741 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCN1O60741 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
HCN1O60741 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
HCN1O60741 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
HCN1O60741 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.37■■□□□ 1.33
HCN1O60741 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCN1O60741 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
HCN1O60741 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HCN1O60741 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.35■■□□□ 1.33
HCN1O60741 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCN1O60741 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
HCN1O60741 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
HCN1O60741 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCN1O60741 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCN1O60741 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
HCN1O60741 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.34■■□□□ 1.33
HCN1O60741 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.34■■□□□ 1.33
HCN1O60741 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.34■■□□□ 1.33
HCN1O60741 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HCN1O60741 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HCN1O60741 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HCN1O60741 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HCN1O60741 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HCN1O60741 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCN1O60741 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HCN1O60741 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HCN1O60741 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
HCN1O60741 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.32■■□□□ 1.32
HCN1O60741 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms