Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.87■■■□□ 2.69
GRIN3BO60391 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.86■■■□□ 2.69
GRIN3BO60391 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
GRIN3BO60391 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.86■■■□□ 2.69
GRIN3BO60391 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
GRIN3BO60391 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC126177.7-201ENST00000547904 679 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
GRIN3BO60391 AC074183.2-201ENST00000623112 922 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 MIR219A2-201ENST00000608502 1504 ntBASIC31.85■■■□□ 2.69
GRIN3BO60391 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.84■■■□□ 2.69
GRIN3BO60391 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.84■■■□□ 2.69
GRIN3BO60391 BHLHE23-202ENST00000612929 1109 ntBASIC31.84■■■□□ 2.69
GRIN3BO60391 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
GRIN3BO60391 AC007029.1-201ENST00000604183 313 ntBASIC31.83■■■□□ 2.69
GRIN3BO60391 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
GRIN3BO60391 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.83■■■□□ 2.69
GRIN3BO60391 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
GRIN3BO60391 AC009831.1-201ENST00000580420 1582 ntBASIC31.82■■■□□ 2.68
GRIN3BO60391 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
GRIN3BO60391 KRT8P33-201ENST00000508125 1423 ntBASIC31.82■■■□□ 2.68
GRIN3BO60391 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.8■■■□□ 2.68
GRIN3BO60391 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.79■■■□□ 2.68
GRIN3BO60391 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
GRIN3BO60391 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
GRIN3BO60391 AC010980.1-201ENST00000587192 1142 ntBASIC31.79■■■□□ 2.68
GRIN3BO60391 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.79■■■□□ 2.68
GRIN3BO60391 YBX1P4-201ENST00000392794 808 ntBASIC31.77■■■□□ 2.68
GRIN3BO60391 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.77■■■□□ 2.68
GRIN3BO60391 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
GRIN3BO60391 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
GRIN3BO60391 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.77■■■□□ 2.68
GRIN3BO60391 AC110285.7-201ENST00000624417 1536 ntBASIC31.76■■■□□ 2.68
GRIN3BO60391 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.76■■■□□ 2.67
GRIN3BO60391 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
GRIN3BO60391 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
GRIN3BO60391 AL356441.2-201ENST00000443009 864 ntBASIC31.75■■■□□ 2.67
GRIN3BO60391 AC025884.2-201ENST00000553429 711 ntBASIC31.75■■■□□ 2.67
GRIN3BO60391 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.75■■■□□ 2.67
GRIN3BO60391 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
GRIN3BO60391 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.75■■■□□ 2.67
GRIN3BO60391 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
GRIN3BO60391 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.73■■■□□ 2.67
GRIN3BO60391 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.73■■■□□ 2.67
GRIN3BO60391 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.73■■■□□ 2.67
GRIN3BO60391 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
GRIN3BO60391 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
GRIN3BO60391 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
GRIN3BO60391 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
GRIN3BO60391 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
GRIN3BO60391 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
GRIN3BO60391 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
GRIN3BO60391 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
GRIN3BO60391 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.69■■■□□ 2.66
GRIN3BO60391 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.69■■■□□ 2.66
GRIN3BO60391 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
GRIN3BO60391 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.68■■■□□ 2.66
GRIN3BO60391 AL157400.5-201ENST00000507624 621 ntBASIC31.68■■■□□ 2.66
GRIN3BO60391 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.67■■■□□ 2.66
GRIN3BO60391 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
GRIN3BO60391 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.66■■■□□ 2.66
GRIN3BO60391 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.66■■■□□ 2.66
GRIN3BO60391 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.66■■■□□ 2.66
GRIN3BO60391 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
GRIN3BO60391 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 WHAMMP2-203ENST00000563942 1603 ntBASIC31.65■■■□□ 2.66
GRIN3BO60391 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
GRIN3BO60391 AC103834.1-201ENST00000520383 144 ntBASIC31.65■■■□□ 2.66
GRIN3BO60391 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
GRIN3BO60391 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
GRIN3BO60391 AC135983.2-203ENST00000454486 1613 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 DUX4L9-201ENST00000449051 1259 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 AC008406.3-201ENST00000620001 1374 ntBASIC31.64■■■□□ 2.66
GRIN3BO60391 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.64■■■□□ 2.65
GRIN3BO60391 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
GRIN3BO60391 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC31.62■■■□□ 2.65
GRIN3BO60391 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.61■■■□□ 2.65
GRIN3BO60391 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.61■■■□□ 2.65
GRIN3BO60391 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
GRIN3BO60391 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
GRIN3BO60391 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.6■■■□□ 2.65
GRIN3BO60391 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.59■■■□□ 2.65
GRIN3BO60391 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms