Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA5O60264 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA5O60264 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA5O60264 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
SMARCA5O60264 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.47■■■□□ 2.63
SMARCA5O60264 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.47■■■□□ 2.63
SMARCA5O60264 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 ZNRF2P2-203ENST00000454624 420 ntBASIC31.46■■■□□ 2.63
SMARCA5O60264 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA5O60264 ABHD17AP4-201ENST00000411545 909 ntBASIC31.45■■■□□ 2.63
SMARCA5O60264 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.45■■■□□ 2.63
SMARCA5O60264 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.45■■■□□ 2.63
SMARCA5O60264 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCA5O60264 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA5O60264 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA5O60264 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
SMARCA5O60264 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA5O60264 AP002414.2-202ENST00000590929 1450 ntBASIC31.41■■■□□ 2.62
SMARCA5O60264 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
SMARCA5O60264 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA5O60264 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SMARCA5O60264 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
SMARCA5O60264 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA5O60264 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA5O60264 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA5O60264 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA5O60264 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
SMARCA5O60264 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA5O60264 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
SMARCA5O60264 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.36■■■□□ 2.61
SMARCA5O60264 LINC01971-201ENST00000617888 1048 ntBASIC31.36■■■□□ 2.61
SMARCA5O60264 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA5O60264 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA5O60264 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMARCA5O60264 AC110285.7-201ENST00000624417 1536 ntBASIC31.35■■■□□ 2.61
SMARCA5O60264 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.35■■■□□ 2.61
SMARCA5O60264 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.35■■■□□ 2.61
SMARCA5O60264 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.33■■■□□ 2.61
SMARCA5O60264 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.33■■■□□ 2.61
SMARCA5O60264 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SMARCA5O60264 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
SMARCA5O60264 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.32■■■□□ 2.6
SMARCA5O60264 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L11-201ENST00000611504 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L12-201ENST00000614593 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L14-201ENST00000621227 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA5O60264 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
SMARCA5O60264 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA5O60264 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA5O60264 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA5O60264 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA5O60264 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA5O60264 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA5O60264 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA5O60264 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA5O60264 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA5O60264 LINC01003-201ENST00000564834 1764 ntBASIC31.26■■■□□ 2.59
SMARCA5O60264 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA5O60264 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
SMARCA5O60264 BX255925.1-201ENST00000566954 1854 ntBASIC31.25■■■□□ 2.59
SMARCA5O60264 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L13-201ENST00000554103 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L15-201ENST00000611059 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L23-201ENST00000615195 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L24-201ENST00000617576 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L22-201ENST00000618238 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L20-201ENST00000619712 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L21-201ENST00000622058 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L10-201ENST00000622460 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L25-201ENST00000624915 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA5O60264 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.22■■■□□ 2.59
SMARCA5O60264 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA5O60264 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SMARCA5O60264 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SMARCA5O60264 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA5O60264 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.21■■■□□ 2.59
SMARCA5O60264 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA5O60264 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA5O60264 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA5O60264 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA5O60264 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms