Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC196A0A1B0GTZ2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
CCDC196A0A1B0GTZ2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.64■■■□□ 2.33
CCDC196A0A1B0GTZ2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
CCDC196A0A1B0GTZ2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC196A0A1B0GTZ2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
CCDC196A0A1B0GTZ2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC196A0A1B0GTZ2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CCDC196A0A1B0GTZ2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.61■■■□□ 2.33
CCDC196A0A1B0GTZ2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.6■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L11-201ENST00000611504 1267 ntBASIC29.6■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L12-201ENST00000614593 1267 ntBASIC29.6■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L14-201ENST00000621227 1267 ntBASIC29.6■■■□□ 2.33
CCDC196A0A1B0GTZ2 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.59■■■□□ 2.33
CCDC196A0A1B0GTZ2 AC110285.7-201ENST00000624417 1536 ntBASIC29.59■■■□□ 2.33
CCDC196A0A1B0GTZ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.59■■■□□ 2.33
CCDC196A0A1B0GTZ2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L13-201ENST00000554103 1267 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L15-201ENST00000611059 1267 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L23-201ENST00000615195 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L24-201ENST00000617576 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L22-201ENST00000618238 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L20-201ENST00000619712 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L21-201ENST00000622058 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L10-201ENST00000622460 1267 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 DUX4L25-201ENST00000624915 1269 ntBASIC29.58■■■□□ 2.33
CCDC196A0A1B0GTZ2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.57■■■□□ 2.32
CCDC196A0A1B0GTZ2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CCDC196A0A1B0GTZ2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
CCDC196A0A1B0GTZ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.57■■■□□ 2.32
CCDC196A0A1B0GTZ2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.56■■■□□ 2.32
CCDC196A0A1B0GTZ2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.56■■■□□ 2.32
CCDC196A0A1B0GTZ2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.55■■■□□ 2.32
CCDC196A0A1B0GTZ2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CCDC196A0A1B0GTZ2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC196A0A1B0GTZ2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC196A0A1B0GTZ2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
CCDC196A0A1B0GTZ2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.52■■■□□ 2.32
CCDC196A0A1B0GTZ2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
CCDC196A0A1B0GTZ2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.52■■■□□ 2.32
CCDC196A0A1B0GTZ2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CCDC196A0A1B0GTZ2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
CCDC196A0A1B0GTZ2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC196A0A1B0GTZ2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
CCDC196A0A1B0GTZ2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.49■■■□□ 2.31
CCDC196A0A1B0GTZ2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.49■■■□□ 2.31
CCDC196A0A1B0GTZ2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
CCDC196A0A1B0GTZ2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.48■■■□□ 2.31
CCDC196A0A1B0GTZ2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC196A0A1B0GTZ2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.47■■■□□ 2.31
CCDC196A0A1B0GTZ2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
CCDC196A0A1B0GTZ2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC196A0A1B0GTZ2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC196A0A1B0GTZ2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC196A0A1B0GTZ2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC196A0A1B0GTZ2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC196A0A1B0GTZ2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC196A0A1B0GTZ2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC196A0A1B0GTZ2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 MIR7108-201ENST00000614319 87 ntBASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 AC018358.1-201ENST00000631079 1402 ntBASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC196A0A1B0GTZ2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC196A0A1B0GTZ2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
CCDC196A0A1B0GTZ2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC196A0A1B0GTZ2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC196A0A1B0GTZ2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC196A0A1B0GTZ2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 BX255925.1-201ENST00000566954 1854 ntBASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 LINC01003-201ENST00000564834 1764 ntBASIC29.41■■■□□ 2.3
CCDC196A0A1B0GTZ2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC196A0A1B0GTZ2 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC196A0A1B0GTZ2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.4■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms