Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-43A0A0B4J1X8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-43A0A0B4J1X8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
IGHV3-43A0A0B4J1X8 BX255925.1-201ENST00000566954 1854 ntBASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
IGHV3-43A0A0B4J1X8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
IGHV3-43A0A0B4J1X8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
IGHV3-43A0A0B4J1X8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGHV3-43A0A0B4J1X8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
IGHV3-43A0A0B4J1X8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IGHV3-43A0A0B4J1X8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.95■□□□□ 0.94
IGHV3-43A0A0B4J1X8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 AP002414.2-202ENST00000590929 1450 ntBASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 RPS2P35-201ENST00000443417 897 ntBASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 LINC01003-201ENST00000564834 1764 ntBASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IGHV3-43A0A0B4J1X8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGHV3-43A0A0B4J1X8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IGHV3-43A0A0B4J1X8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.93■□□□□ 0.94
IGHV3-43A0A0B4J1X8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-43A0A0B4J1X8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-43A0A0B4J1X8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-43A0A0B4J1X8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-43A0A0B4J1X8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IGHV3-43A0A0B4J1X8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IGHV3-43A0A0B4J1X8 AL121749.1-202ENST00000609313 2153 ntBASIC20.9■□□□□ 0.94
IGHV3-43A0A0B4J1X8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
IGHV3-43A0A0B4J1X8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
IGHV3-43A0A0B4J1X8 AC021231.2-201ENST00000594613 730 ntBASIC20.89■□□□□ 0.93
IGHV3-43A0A0B4J1X8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IGHV3-43A0A0B4J1X8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
IGHV3-43A0A0B4J1X8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IGHV3-43A0A0B4J1X8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
IGHV3-43A0A0B4J1X8 DUX4L29-201ENST00000425409 679 ntBASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IGHV3-43A0A0B4J1X8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.86■□□□□ 0.93
IGHV3-43A0A0B4J1X8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.85■□□□□ 0.93
IGHV3-43A0A0B4J1X8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
IGHV3-43A0A0B4J1X8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IGHV3-43A0A0B4J1X8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
IGHV3-43A0A0B4J1X8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IGHV3-43A0A0B4J1X8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IGHV3-43A0A0B4J1X8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.82■□□□□ 0.92
IGHV3-43A0A0B4J1X8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
IGHV3-43A0A0B4J1X8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
IGHV3-43A0A0B4J1X8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
IGHV3-43A0A0B4J1X8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms