Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 AC004264.1-201ENST00000608354 794 ntBASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRGV1A0A0A0MS02 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 CD99P1-205ENST00000527459 561 ntBASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.91□□□□□ -0.18
TRGV1A0A0A0MS02 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 AC239809.2-201ENST00000415381 517 ntBASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TRGV1A0A0A0MS02 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRGV1A0A0A0MS02 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRGV1A0A0A0MS02 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRGV1A0A0A0MS02 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRGV1A0A0A0MS02 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
TRGV1A0A0A0MS02 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms