RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 NISCHQ9Y2I1 1504 aa39.06■■■■□ 3.84
SMARCC2-201ENST00000267064 DCAF8L2P0C7V8 631 aa34.52■■■■□ 3.12
SMARCC2-201ENST00000267064 SHROOM4Q9ULL8 1493 aa33.98■■■■□ 3.03
SMARCC2-201ENST00000267064 SUPT5HO00267 1087 aaKnown RBP33.19■■■□□ 2.9
SMARCC2-201ENST00000267064 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
SMARCC2-201ENST00000267064 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
SMARCC2-201ENST00000267064 ABCC9O60706 1549 aa32.48■■■□□ 2.79
SMARCC2-201ENST00000267064 SCRIBQ14160 1630 aa31.63■■■□□ 2.65
SMARCC2-201ENST00000267064 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
SMARCC2-201ENST00000267064 PABPN1Q86U42 306 aaKnown RBP eCLIP31.3■■■□□ 2.6
SMARCC2-201ENST00000267064 CHIC1Q5VXU3 224 aa31.19■■■□□ 2.58
SMARCC2-201ENST00000267064 NACADO15069 1562 aa31.14■■■□□ 2.58
SMARCC2-201ENST00000267064 EHMT2Q96KQ7 1210 aa31.02■■■□□ 2.56
SMARCC2-201ENST00000267064 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
SMARCC2-201ENST00000267064 FAM9AQ8IZU1 332 aaPredicted RBP30.9■■■□□ 2.54
SMARCC2-201ENST00000267064 MYO15BQ96JP2 1530 aa30.89■■■□□ 2.54
SMARCC2-201ENST00000267064 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
SMARCC2-201ENST00000267064 TRIM41Q8WV44 630 aa30.79■■■□□ 2.52
SMARCC2-201ENST00000267064 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.52
SMARCC2-201ENST00000267064 LOC105371045A0A1W2PR82 267 aa30.59■■■□□ 2.49
SMARCC2-201ENST00000267064 MROH2BQ7Z745 1585 aa30.42■■■□□ 2.46
SMARCC2-201ENST00000267064 BAZ1AQ9NRL2 1556 aaPredicted RBP30.13■■■□□ 2.41
SMARCC2-201ENST00000267064 WIZO95785 1651 aa30.13■■■□□ 2.41
SMARCC2-201ENST00000267064 PCGF6Q9BYE7 350 aa30.02■■■□□ 2.4
SMARCC2-201ENST00000267064 SMARCA4P51532 1647 aa29.8■■■□□ 2.36
SMARCC2-201ENST00000267064 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
SMARCC2-201ENST00000267064 RANGAP1P46060 587 aaPredicted RBP29.75■■■□□ 2.35
SMARCC2-201ENST00000267064 TTBK1Q5TCY1 1321 aaPredicted RBP29.74■■■□□ 2.35
SMARCC2-201ENST00000267064 PPARGC1BQ86YN6 1023 aaKnown RBP29.74■■■□□ 2.35
SMARCC2-201ENST00000267064 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
SMARCC2-201ENST00000267064 UBTFP17480 764 aaKnown RBP29.71■■■□□ 2.35
SMARCC2-201ENST00000267064 CCDC88BA6NC98 1476 aa29.7■■■□□ 2.35
SMARCC2-201ENST00000267064 BAZ1BQ9UIG0 1483 aaKnown RBP29.62■■■□□ 2.33
SMARCC2-201ENST00000267064 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
SMARCC2-201ENST00000267064 ATAD2BQ9ULI0 1458 aa29.47■■■□□ 2.31
SMARCC2-201ENST00000267064 ABCC8Q09428 1581 aa29.46■■■□□ 2.31
SMARCC2-201ENST00000267064 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
SMARCC2-201ENST00000267064 CSRNP3Q8WYN3 585 aa29.32■■■□□ 2.28
SMARCC2-201ENST00000267064 TRIM26Q12899 539 aaPredicted RBP29.26■■■□□ 2.27
SMARCC2-201ENST00000267064 WRNQ14191 1432 aaPredicted RBP eCLIP29.24■■■□□ 2.27
SMARCC2-201ENST00000267064 SOGA1O94964 1423 aa29.18■■■□□ 2.26
SMARCC2-201ENST00000267064 EIF4G1Q04637 1599 aaKnown RBP29.14■■■□□ 2.26
SMARCC2-201ENST00000267064 APLP2Q06481 763 aa29.08■■■□□ 2.25
SMARCC2-201ENST00000267064 RUSC2Q8N2Y8 1516 aa28.96■■■□□ 2.23
SMARCC2-201ENST00000267064 HRCP23327 699 aa28.94■■■□□ 2.22
SMARCC2-201ENST00000267064 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
SMARCC2-201ENST00000267064 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
SMARCC2-201ENST00000267064 ATP1B4Q9UN42 357 aaPredicted RBP28.82■■■□□ 2.2
SMARCC2-201ENST00000267064 EEA1Q15075 1411 aa28.73■■■□□ 2.19
SMARCC2-201ENST00000267064 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
SMARCC2-201ENST00000267064 CADPSQ9ULU8 1353 aa28.67■■■□□ 2.18
SMARCC2-201ENST00000267064 DNAJC5BQ9UF47 199 aa28.67■■■□□ 2.18
SMARCC2-201ENST00000267064 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
SMARCC2-201ENST00000267064 CCER1Q8TC90 406 aaPredicted RBP28.65■■■□□ 2.18
SMARCC2-201ENST00000267064 GOLGA3Q08378 1498 aa28.64■■■□□ 2.18
SMARCC2-201ENST00000267064 SYNJ1O43426 1573 aa28.64■■■□□ 2.18
SMARCC2-201ENST00000267064 HMGXB3Q12766 1538 aa28.62■■■□□ 2.17
SMARCC2-201ENST00000267064 TNIKQ9UKE5 1360 aa28.62■■■□□ 2.17
SMARCC2-201ENST00000267064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
SMARCC2-201ENST00000267064 HNRNPUL2Q1KMD3 747 aaKnown RBP28.57■■■□□ 2.16
SMARCC2-201ENST00000267064 P3H3Q8IVL6 736 aa28.55■■■□□ 2.16
SMARCC2-201ENST00000267064 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
SMARCC2-201ENST00000267064 CLIP1P30622 1438 aa28.51■■■□□ 2.15
SMARCC2-201ENST00000267064 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
SMARCC2-201ENST00000267064 CFTRP13569 1480 aa28.49■■■□□ 2.15
SMARCC2-201ENST00000267064 CUX2O14529 1486 aa28.44■■■□□ 2.14
SMARCC2-201ENST00000267064 NESP48681 1621 aa28.42■■■□□ 2.14
SMARCC2-201ENST00000267064 RAPGEF2Q9Y4G8 1499 aa28.42■■■□□ 2.14
SMARCC2-201ENST00000267064 ITGAEP38570 1179 aa28.38■■■□□ 2.13
SMARCC2-201ENST00000267064 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
SMARCC2-201ENST00000267064 ZEB1P37275 1124 aaPredicted RBP28.35■■■□□ 2.13
SMARCC2-201ENST00000267064 CUX1P39880 1505 aa28.32■■■□□ 2.12
SMARCC2-201ENST00000267064 TOP2BQ02880 1626 aa28.25■■■□□ 2.11
SMARCC2-201ENST00000267064 CARMIL1Q5VZK9 1371 aa28.21■■■□□ 2.11
SMARCC2-201ENST00000267064 FGD5Q6ZNL6 1462 aa28.2■■■□□ 2.11
SMARCC2-201ENST00000267064 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
SMARCC2-201ENST00000267064 FBLN2P98095 1184 aa28.17■■■□□ 2.1
SMARCC2-201ENST00000267064 RAD54L2Q9Y4B4 1467 aa28.16■■■□□ 2.1
SMARCC2-201ENST00000267064 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
SMARCC2-201ENST00000267064 IGF1RP08069 1367 aa28.08■■■□□ 2.09
SMARCC2-201ENST00000267064 ARID3CA6NKF2 412 aa28.08■■■□□ 2.09
SMARCC2-201ENST00000267064 VPS8Q8N3P4 1428 aa28.02■■■□□ 2.08
SMARCC2-201ENST00000267064 FAM50AQ14320 339 aaKnown RBP27.98■■■□□ 2.07
SMARCC2-201ENST00000267064 KIF21BO75037 1637 aa27.96■■■□□ 2.07
SMARCC2-201ENST00000267064 KANK4Q5T7N3 995 aaPredicted RBP27.96■■■□□ 2.07
SMARCC2-201ENST00000267064 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
SMARCC2-201ENST00000267064 PRXQ9BXM0 1461 aa27.93■■■□□ 2.06
SMARCC2-201ENST00000267064 BIVM-ERCC5R4GMW8 1640 aa27.93■■■□□ 2.06
SMARCC2-201ENST00000267064 TOPBP1Q92547 1522 aa27.91■■■□□ 2.06
SMARCC2-201ENST00000267064 POLA1P09884 1462 aaPredicted RBP27.88■■■□□ 2.05
SMARCC2-201ENST00000267064 DNMBPQ6XZF7 1577 aa27.75■■■□□ 2.03
SMARCC2-201ENST00000267064 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
SMARCC2-201ENST00000267064 CHMP7Q8WUX9 453 aaPredicted RBP27.74■■■□□ 2.03
SMARCC2-201ENST00000267064 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
SMARCC2-201ENST00000267064 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
SMARCC2-201ENST00000267064 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
SMARCC2-201ENST00000267064 FHOD3Q2V2M9 1422 aa27.7■■■□□ 2.02
SMARCC2-201ENST00000267064 AQRO60306 1485 aaKnown RBP eCLIP27.7■■■□□ 2.021e-7■■■■□ 24.9
SMARCC2-201ENST00000267064 GAPVD1Q14C86 1478 aa27.69■■■□□ 2.02
SMARCC2-201ENST00000267064 ARHGAP35Q9NRY4 1499 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms