RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 DCAF8L2P0C7V8 631 aa28.75■■■□□ 2.19
CACNA1A-238ENST00000637276 EHMT2Q96KQ7 1210 aa27.68■■■□□ 2.02
CACNA1A-238ENST00000637276 TTBK1Q5TCY1 1321 aaPredicted RBP26.58■■□□□ 1.85
CACNA1A-238ENST00000637276 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
CACNA1A-238ENST00000637276 PELP1Q8IZL8 1130 aaKnown RBP26.18■■□□□ 1.78
CACNA1A-238ENST00000637276 MYT1Q01538 1121 aa26.15■■□□□ 1.78
CACNA1A-238ENST00000637276 ERICH6Q7L0X2 663 aa26.12■■□□□ 1.77
CACNA1A-238ENST00000637276 RANGAP1P46060 587 aaPredicted RBP26.08■■□□□ 1.76
CACNA1A-238ENST00000637276 SHROOM4Q9ULL8 1493 aa25.88■■□□□ 1.73
CACNA1A-238ENST00000637276 ATP1B4Q9UN42 357 aaPredicted RBP25.73■■□□□ 1.71
CACNA1A-238ENST00000637276 APLP2Q06481 763 aa25.63■■□□□ 1.69
CACNA1A-238ENST00000637276 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
CACNA1A-238ENST00000637276 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
CACNA1A-238ENST00000637276 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
CACNA1A-238ENST00000637276 YTHDC1Q96MU7 727 aaKnown RBP25.35■■□□□ 1.65
CACNA1A-238ENST00000637276 CNGB1Q14028 1251 aaPredicted RBP25.31■■□□□ 1.64
CACNA1A-238ENST00000637276 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
CACNA1A-238ENST00000637276 POLR3GLQ9BT43 218 aa25.08■■□□□ 1.61
CACNA1A-238ENST00000637276 MYT1LQ9UL68 1186 aa25.05■■□□□ 1.6
CACNA1A-238ENST00000637276 SLC4A1APQ9BWU0 796 aaKnown RBP24.83■■□□□ 1.57
CACNA1A-238ENST00000637276 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
CACNA1A-238ENST00000637276 NEFLP07196 543 aa24.71■■□□□ 1.55
CACNA1A-238ENST00000637276 DAXXQ9UER7 740 aaPredicted RBP24.7■■□□□ 1.54
CACNA1A-238ENST00000637276 BCL11AQ9H165 835 aa24.68■■□□□ 1.54
CACNA1A-238ENST00000637276 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
CACNA1A-238ENST00000637276 ITGAEP38570 1179 aa24.45■■□□□ 1.5
CACNA1A-238ENST00000637276 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.49
CACNA1A-238ENST00000637276 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.49
CACNA1A-238ENST00000637276 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
CACNA1A-238ENST00000637276 UBTFP17480 764 aaKnown RBP24.3■■□□□ 1.48
CACNA1A-238ENST00000637276 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.46
CACNA1A-238ENST00000637276 ZNF316A6NFI3 1004 aaPredicted RBP24.11■■□□□ 1.45
CACNA1A-238ENST00000637276 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
CACNA1A-238ENST00000637276 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
CACNA1A-238ENST00000637276 ZEB1P37275 1124 aaPredicted RBP23.91■■□□□ 1.42
CACNA1A-238ENST00000637276 NISCHQ9Y2I1 1504 aa23.76■■□□□ 1.39
CACNA1A-238ENST00000637276 BCANQ96GW7 911 aa23.72■■□□□ 1.39
CACNA1A-238ENST00000637276 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
CACNA1A-238ENST00000637276 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
CACNA1A-238ENST00000637276 ZBTB47Q9UFB7 747 aaPredicted RBP23.45■■□□□ 1.35
CACNA1A-238ENST00000637276 PLEKHG5O94827 1062 aa23.4■■□□□ 1.34
CACNA1A-238ENST00000637276 A0A0G2JS52 829 aa23.37■■□□□ 1.33
CACNA1A-238ENST00000637276 TULP1O00294 542 aaPredicted RBP23.34■■□□□ 1.33
CACNA1A-238ENST00000637276 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CACNA1A-238ENST00000637276 HRCP23327 699 aa23.3■■□□□ 1.32
CACNA1A-238ENST00000637276 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
CACNA1A-238ENST00000637276 TRIM52Q96A61 297 aa23.27■■□□□ 1.32
CACNA1A-238ENST00000637276 ARXQ96QS3 562 aa23.27■■□□□ 1.32
CACNA1A-238ENST00000637276 NPM2Q86SE8 214 aaKnown RBP23.25■■□□□ 1.31
CACNA1A-238ENST00000637276 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
CACNA1A-238ENST00000637276 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
CACNA1A-238ENST00000637276 FAM50AQ14320 339 aaKnown RBP23.21■■□□□ 1.31
CACNA1A-238ENST00000637276 EIF5BO60841 1220 aaKnown RBP23.2■■□□□ 1.3
CACNA1A-238ENST00000637276 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
CACNA1A-238ENST00000637276 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
CACNA1A-238ENST00000637276 SCAF1Q9H7N4 1312 aaKnown RBP23.19■■□□□ 1.3
CACNA1A-238ENST00000637276 ARID3CA6NKF2 412 aa23.14■■□□□ 1.29
CACNA1A-238ENST00000637276 FBLN2P98095 1184 aa23.04■■□□□ 1.28
CACNA1A-238ENST00000637276 ZBTB7CA1YPR0 619 aa22.94■■□□□ 1.26
CACNA1A-238ENST00000637276 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-238ENST00000637276 TPRNQ4KMQ1 711 aa22.91■■□□□ 1.26
CACNA1A-238ENST00000637276 TAOK2Q9UL54 1235 aa22.87■■□□□ 1.25
CACNA1A-238ENST00000637276 SALL2Q9Y467 1007 aaPredicted RBP22.86■■□□□ 1.25
CACNA1A-238ENST00000637276 HSP90AA1P07900 732 aaKnown RBP22.82■■□□□ 1.24
CACNA1A-238ENST00000637276 NEFMP07197 916 aa22.79■■□□□ 1.24
CACNA1A-238ENST00000637276 CDK11AQ9UQ88 783 aaPredicted RBP22.77■■□□□ 1.24
CACNA1A-238ENST00000637276 GTF3C3Q9Y5Q9 886 aa22.76■■□□□ 1.23
CACNA1A-238ENST00000637276 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
CACNA1A-238ENST00000637276 CDK11BP21127 795 aaKnown RBP22.67■■□□□ 1.22
CACNA1A-238ENST00000637276 NBR1Q14596 966 aa22.62■■□□□ 1.21
CACNA1A-238ENST00000637276 STAG3Q9UJ98 1225 aa22.62■■□□□ 1.21
CACNA1A-238ENST00000637276 AMER1Q5JTC6 1135 aaPredicted RBP22.6■■□□□ 1.21
CACNA1A-238ENST00000637276 ZNF777Q9ULD5 760 aaPredicted RBP22.58■■□□□ 1.21
CACNA1A-238ENST00000637276 ANP32BQ92688 251 aaKnown RBP22.58■■□□□ 1.2
CACNA1A-238ENST00000637276 ANP32CO43423 234 aa22.55■■□□□ 1.2
CACNA1A-238ENST00000637276 ESF1Q9H501 851 aaKnown RBP22.54■■□□□ 1.2
CACNA1A-238ENST00000637276 P3H3Q8IVL6 736 aa22.53■■□□□ 1.2
CACNA1A-238ENST00000637276 C14orf37Q86TY3 774 aa22.5■■□□□ 1.19
CACNA1A-238ENST00000637276 SENP3-EIF4A1A0A087X0R7 540 aa22.48■■□□□ 1.19
CACNA1A-238ENST00000637276 ANP32AP39687 249 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-238ENST00000637276 CLSTN1O94985 981 aa22.31■■□□□ 1.16
CACNA1A-238ENST00000637276 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-238ENST00000637276 FAM9BQ8IZU0 186 aa22.25■■□□□ 1.15
CACNA1A-238ENST00000637276 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
CACNA1A-238ENST00000637276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.15
CACNA1A-238ENST00000637276 HAP1P54257 671 aaPredicted RBP22.2■■□□□ 1.15
CACNA1A-238ENST00000637276 PABPN1Q86U42 306 aaKnown RBP eCLIP22.2■■□□□ 1.15
CACNA1A-238ENST00000637276 NPHP1O15259 732 aa22.2■■□□□ 1.14
CACNA1A-238ENST00000637276 FKBP8Q14318 412 aa22.16■■□□□ 1.14
CACNA1A-238ENST00000637276 NCLP19338 710 aaKnown RBP22.15■■□□□ 1.14
CACNA1A-238ENST00000637276 PRM3Q9NNZ6 103 aa22.14■■□□□ 1.13
CACNA1A-238ENST00000637276 UPF2Q9HAU5 1272 aaKnown RBP22.13■■□□□ 1.13
CACNA1A-238ENST00000637276 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
CACNA1A-238ENST00000637276 PDE4CQ08493 712 aa22.08■■□□□ 1.13
CACNA1A-238ENST00000637276 FBXO3Q9UK99 471 aa22.08■■□□□ 1.12
CACNA1A-238ENST00000637276 KDM2AQ9Y2K7 1162 aa22.03■■□□□ 1.12
CACNA1A-238ENST00000637276 PLCB2Q00722 1185 aa22■■□□□ 1.11
CACNA1A-238ENST00000637276 LMOD2Q6P5Q4 547 aa22■■□□□ 1.11
CACNA1A-238ENST00000637276 GLIPR1L2Q4G1C9 344 aa21.99■■□□□ 1.11
CACNA1A-238ENST00000637276 ISY1Q9ULR0 285 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms