RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 NISCHQ9Y2I1 1504 aa39.24■■■■□ 3.87
SCARB1-201ENST00000261693 SHROOM4Q9ULL8 1493 aa33.97■■■■□ 3.03
SCARB1-201ENST00000261693 SUPT5HO00267 1087 aaKnown RBP33.44■■■□□ 2.94
SCARB1-201ENST00000261693 ZCCHC6Q5VYS8 1495 aaKnown RBP33.22■■■□□ 2.91
SCARB1-201ENST00000261693 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
SCARB1-201ENST00000261693 DCAF8L2P0C7V8 631 aa32.78■■■□□ 2.84
SCARB1-201ENST00000261693 CHIC1Q5VXU3 224 aa32.53■■■□□ 2.8
SCARB1-201ENST00000261693 MYO15BQ96JP2 1530 aa32.53■■■□□ 2.8
SCARB1-201ENST00000261693 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
SCARB1-201ENST00000261693 HRCP23327 699 aa32.04■■■□□ 2.72
SCARB1-201ENST00000261693 PCGF6Q9BYE7 350 aa31.95■■■□□ 2.71
SCARB1-201ENST00000261693 LOC105371045A0A1W2PR82 267 aa31.71■■■□□ 2.67
SCARB1-201ENST00000261693 PPARGC1BQ86YN6 1023 aaKnown RBP31.5■■■□□ 2.63
SCARB1-201ENST00000261693 ABCC9O60706 1549 aa31.42■■■□□ 2.62
SCARB1-201ENST00000261693 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
SCARB1-201ENST00000261693 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
SCARB1-201ENST00000261693 TRIM26Q12899 539 aaPredicted RBP31.13■■■□□ 2.57
SCARB1-201ENST00000261693 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
SCARB1-201ENST00000261693 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
SCARB1-201ENST00000261693 FAM9AQ8IZU1 332 aaPredicted RBP30.94■■■□□ 2.54
SCARB1-201ENST00000261693 EHMT2Q96KQ7 1210 aa30.79■■■□□ 2.52
SCARB1-201ENST00000261693 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
SCARB1-201ENST00000261693 MROH2BQ7Z745 1585 aa30.59■■■□□ 2.49
SCARB1-201ENST00000261693 NACADO15069 1562 aa30.57■■■□□ 2.48
SCARB1-201ENST00000261693 ZEB1P37275 1124 aaPredicted RBP30.5■■■□□ 2.47
SCARB1-201ENST00000261693 WIZO95785 1651 aa30.48■■■□□ 2.47
SCARB1-201ENST00000261693 BAZ1AQ9NRL2 1556 aaPredicted RBP30.2■■■□□ 2.42
SCARB1-201ENST00000261693 EIF4G1Q04637 1599 aaKnown RBP30.06■■■□□ 2.4
SCARB1-201ENST00000261693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.97■■■□□ 2.39
SCARB1-201ENST00000261693 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
SCARB1-201ENST00000261693 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
SCARB1-201ENST00000261693 CCDC88BA6NC98 1476 aa29.88■■■□□ 2.37
SCARB1-201ENST00000261693 CCER1Q8TC90 406 aaPredicted RBP29.87■■■□□ 2.37
SCARB1-201ENST00000261693 TTBK1Q5TCY1 1321 aaPredicted RBP29.85■■■□□ 2.37
SCARB1-201ENST00000261693 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
SCARB1-201ENST00000261693 SCAF1Q9H7N4 1312 aaKnown RBP29.78■■■□□ 2.36
SCARB1-201ENST00000261693 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
SCARB1-201ENST00000261693 SOGA1O94964 1423 aa29.72■■■□□ 2.35
SCARB1-201ENST00000261693 UNC13AQ9UPW8 1703 aa29.72■■■□□ 2.35
SCARB1-201ENST00000261693 CEP162Q5TB80 1403 aa29.68■■■□□ 2.34
SCARB1-201ENST00000261693 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
SCARB1-201ENST00000261693 RUSC2Q8N2Y8 1516 aa29.58■■■□□ 2.33
SCARB1-201ENST00000261693 UBTFP17480 764 aaKnown RBP29.56■■■□□ 2.32
SCARB1-201ENST00000261693 TNIKQ9UKE5 1360 aa29.55■■■□□ 2.32
SCARB1-201ENST00000261693 CSRNP3Q8WYN3 585 aa29.54■■■□□ 2.32
SCARB1-201ENST00000261693 PABPN1Q86U42 306 aaKnown RBP eCLIP29.49■■■□□ 2.31
SCARB1-201ENST00000261693 EEA1Q15075 1411 aa29.42■■■□□ 2.3
SCARB1-201ENST00000261693 DIEXFQ68CQ4 756 aaKnown RBP29.42■■■□□ 2.3
SCARB1-201ENST00000261693 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
SCARB1-201ENST00000261693 NEUROD1Q13562 356 aa29.34■■■□□ 2.29
SCARB1-201ENST00000261693 GOLGA3Q08378 1498 aa29.34■■■□□ 2.29
SCARB1-201ENST00000261693 PELP1Q8IZL8 1130 aaKnown RBP29.3■■■□□ 2.28
SCARB1-201ENST00000261693 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
SCARB1-201ENST00000261693 SYNJ1O43426 1573 aa29.19■■■□□ 2.26
SCARB1-201ENST00000261693 PEG3Q9GZU2 1588 aa29.14■■■□□ 2.25
SCARB1-201ENST00000261693 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
SCARB1-201ENST00000261693 CEP164Q9UPV0 1460 aa29.12■■■□□ 2.25
SCARB1-201ENST00000261693 CENPBP07199 599 aaPredicted RBP29.1■■■□□ 2.25
SCARB1-201ENST00000261693 ZNF316A6NFI3 1004 aaPredicted RBP29.08■■■□□ 2.25
SCARB1-201ENST00000261693 GTF3C3Q9Y5Q9 886 aa29.08■■■□□ 2.25
SCARB1-201ENST00000261693 CLIP1P30622 1438 aa29.07■■■□□ 2.24
SCARB1-201ENST00000261693 RANGAP1P46060 587 aaPredicted RBP29.06■■■□□ 2.24
SCARB1-201ENST00000261693 KIF21BO75037 1637 aa29.05■■■□□ 2.24
SCARB1-201ENST00000261693 ATAD2BQ9ULI0 1458 aa29■■■□□ 2.23
SCARB1-201ENST00000261693 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
SCARB1-201ENST00000261693 RAPGEF2Q9Y4G8 1499 aa28.96■■■□□ 2.23
SCARB1-201ENST00000261693 VPS8Q8N3P4 1428 aa28.93■■■□□ 2.22
SCARB1-201ENST00000261693 APLP2Q06481 763 aa28.92■■■□□ 2.22
SCARB1-201ENST00000261693 YTHDC1Q96MU7 727 aaKnown RBP28.88■■■□□ 2.21
SCARB1-201ENST00000261693 MIER1Q8N108 512 aa28.78■■■□□ 2.2
SCARB1-201ENST00000261693 TOP2BQ02880 1626 aa28.73■■■□□ 2.19
SCARB1-201ENST00000261693 BIVM-ERCC5R4GMW8 1640 aa28.59■■■□□ 2.17
SCARB1-201ENST00000261693 KANK4Q5T7N3 995 aaPredicted RBP28.54■■■□□ 2.16
SCARB1-201ENST00000261693 ARAP1Q96P48 1450 aa28.54■■■□□ 2.16
SCARB1-201ENST00000261693 PRXQ9BXM0 1461 aa28.54■■■□□ 2.16
SCARB1-201ENST00000261693 ERICH3Q5RHP9 1530 aa28.52■■■□□ 2.16
SCARB1-201ENST00000261693 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
SCARB1-201ENST00000261693 CUX1P39880 1505 aa28.44■■■□□ 2.14
SCARB1-201ENST00000261693 KIF27Q86VH2 1401 aa28.37■■■□□ 2.13
SCARB1-201ENST00000261693 CLSPNQ9HAW4 1339 aa28.36■■■□□ 2.13
SCARB1-201ENST00000261693 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
SCARB1-201ENST00000261693 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
SCARB1-201ENST00000261693 ITGAEP38570 1179 aa28.29■■■□□ 2.12
SCARB1-201ENST00000261693 RRBP1Q9P2E9 1410 aaKnown RBP28.27■■■□□ 2.12
SCARB1-201ENST00000261693 ARHGAP35Q9NRY4 1499 aa28.25■■■□□ 2.11
SCARB1-201ENST00000261693 CFTRP13569 1480 aa28.21■■■□□ 2.11
SCARB1-201ENST00000261693 CCNB3Q8WWL7 1395 aa28.21■■■□□ 2.11
SCARB1-201ENST00000261693 CUX2O14529 1486 aa28.1■■■□□ 2.09
SCARB1-201ENST00000261693 IGF1RP08069 1367 aa28.06■■■□□ 2.08
SCARB1-201ENST00000261693 RAB3GAP2Q9H2M9 1393 aa28.03■■■□□ 2.08
SCARB1-201ENST00000261693 TIAM1Q13009 1591 aa27.97■■■□□ 2.07
SCARB1-201ENST00000261693 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
SCARB1-201ENST00000261693 CARMIL1Q5VZK9 1371 aa27.96■■■□□ 2.07
SCARB1-201ENST00000261693 MAPKBP1O60336 1514 aa27.93■■■□□ 2.06
SCARB1-201ENST00000261693 P3H3Q8IVL6 736 aa27.91■■■□□ 2.06
SCARB1-201ENST00000261693 SUPT16HQ9Y5B9 1047 aaKnown RBP27.91■■■□□ 2.06
SCARB1-201ENST00000261693 FGD5Q6ZNL6 1462 aa27.9■■■□□ 2.06
SCARB1-201ENST00000261693 FAM50AQ14320 339 aaKnown RBP27.89■■■□□ 2.06
SCARB1-201ENST00000261693 ATP1B4Q9UN42 357 aaPredicted RBP27.89■■■□□ 2.06
SCARB1-201ENST00000261693 PHLDB1Q86UU1 1377 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms