RNA–Protein interactions for RNA: ENST00000476567.1

LCN6-203, Transcript of lipocalin 6, humanhuman

TSL 1 (best) BASIC

Gene LCN6, Length 1,015 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN6-203ENST00000476567 NISCHQ9Y2I1 1504 aa49.9■■■■■ 5.58
LCN6-203ENST00000476567 CCDC180Q9P1Z9 1646 aa44.64■■■■■ 4.74
LCN6-203ENST00000476567 ABCC9O60706 1549 aa44.21■■■■■ 4.67
LCN6-203ENST00000476567 RB1CC1Q8TDY2 1594 aa42.24■■■■■ 4.35
LCN6-203ENST00000476567 NACADO15069 1562 aa42.05■■■■■ 4.32
LCN6-203ENST00000476567 DCAF8L2P0C7V8 631 aa41.87■■■■■ 4.29
LCN6-203ENST00000476567 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
LCN6-203ENST00000476567 UNC13AQ9UPW8 1703 aa41.49■■■■■ 4.23
LCN6-203ENST00000476567 ZCCHC6Q5VYS8 1495 aaKnown RBP41.46■■■■■ 4.23
LCN6-203ENST00000476567 DCAF1Q9Y4B6 1507 aa41.23■■■■■ 4.19
LCN6-203ENST00000476567 PABPN1Q86U42 306 aaKnown RBP eCLIP41.21■■■■■ 4.19
LCN6-203ENST00000476567 DNAJC5BQ9UF47 199 aa41.15■■■■■ 4.18
LCN6-203ENST00000476567 BICRAQ9NZM4 1560 aa41.09■■■■■ 4.17
LCN6-203ENST00000476567 SCRIBQ14160 1630 aa40.71■■■■■ 4.11
LCN6-203ENST00000476567 SHROOM4Q9ULL8 1493 aa40.43■■■■■ 4.06
LCN6-203ENST00000476567 CC2D2AQ9P2K1 1620 aa40■■■■□ 3.99
LCN6-203ENST00000476567 EIF4G1Q04637 1599 aaKnown RBP40■■■■□ 3.99
LCN6-203ENST00000476567 CECR2Q9BXF3 1484 aa39.75■■■■□ 3.95
LCN6-203ENST00000476567 SMARCA4P51532 1647 aa38.88■■■■□ 3.81
LCN6-203ENST00000476567 NCAPD3P42695 1498 aa38.8■■■■□ 3.8
LCN6-203ENST00000476567 ATAD2BQ9ULI0 1458 aa38.77■■■■□ 3.8
LCN6-203ENST00000476567 BAZ1AQ9NRL2 1556 aaPredicted RBP38.69■■■■□ 3.78
LCN6-203ENST00000476567 SMARCA2P51531 1590 aa38.65■■■■□ 3.78
LCN6-203ENST00000476567 HMGXB3Q12766 1538 aa38.58■■■■□ 3.77
LCN6-203ENST00000476567 MROH2BQ7Z745 1585 aa38.49■■■■□ 3.75
LCN6-203ENST00000476567 PEG3Q9GZU2 1588 aa38.48■■■■□ 3.75
LCN6-203ENST00000476567 BAZ1BQ9UIG0 1483 aaKnown RBP38.4■■■■□ 3.74
LCN6-203ENST00000476567 NESP48681 1621 aa38.14■■■■□ 3.7
LCN6-203ENST00000476567 WIZO95785 1651 aa38.1■■■■□ 3.69
LCN6-203ENST00000476567 ERCC6Q03468 1493 aa38.08■■■■□ 3.69
LCN6-203ENST00000476567 LAMC3Q9Y6N6 1575 aa37.89■■■■□ 3.66
LCN6-203ENST00000476567 CUX2O14529 1486 aa37.88■■■■□ 3.65
LCN6-203ENST00000476567 RSF1Q96T23 1441 aaPredicted RBP37.81■■■■□ 3.64
LCN6-203ENST00000476567 KIF21AQ7Z4S6 1674 aa37.72■■■■□ 3.63
LCN6-203ENST00000476567 THOC2Q8NI27 1593 aaKnown RBP37.68■■■■□ 3.62
LCN6-203ENST00000476567 CADPSQ9ULU8 1353 aa37.63■■■■□ 3.61
LCN6-203ENST00000476567 PDS5BQ9NTI5 1447 aa37.59■■■■□ 3.61
LCN6-203ENST00000476567 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
LCN6-203ENST00000476567 DNAJC5Q9H3Z4 198 aa37.4■■■■□ 3.58
LCN6-203ENST00000476567 CFTRP13569 1480 aa37.32■■■■□ 3.56
LCN6-203ENST00000476567 MRC2Q9UBG0 1479 aa37.29■■■■□ 3.56
LCN6-203ENST00000476567 FANCD2Q9BXW9 1451 aa37.23■■■■□ 3.55
LCN6-203ENST00000476567 WDR62O43379 1518 aa37.21■■■■□ 3.55
LCN6-203ENST00000476567 CEP164Q9UPV0 1460 aa37.21■■■■□ 3.55
LCN6-203ENST00000476567 CCDC88BA6NC98 1476 aa37.14■■■■□ 3.54
LCN6-203ENST00000476567 PRDM2Q13029 1718 aa37.12■■■■□ 3.53
LCN6-203ENST00000476567 URB2Q14146 1524 aaKnown RBP36.94■■■■□ 3.5
LCN6-203ENST00000476567 TOPBP1Q92547 1522 aa36.59■■■■□ 3.45
LCN6-203ENST00000476567 DNMBPQ6XZF7 1577 aa36.49■■■■□ 3.43
LCN6-203ENST00000476567 ABCC8Q09428 1581 aa36.46■■■■□ 3.43
LCN6-203ENST00000476567 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
LCN6-203ENST00000476567 ZNF608Q9ULD9 1512 aaPredicted RBP36.42■■■■□ 3.42
LCN6-203ENST00000476567 SUPT5HO00267 1087 aaKnown RBP36.4■■■■□ 3.42
LCN6-203ENST00000476567 TARBP1Q13395 1621 aaKnown RBP36.29■■■■□ 3.4
LCN6-203ENST00000476567 EIF4G3O43432 1585 aaKnown RBP36.25■■■■□ 3.39
LCN6-203ENST00000476567 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
LCN6-203ENST00000476567 OSCARQ8IYS5 282 aa36.19■■■■□ 3.38
LCN6-203ENST00000476567 CUX1P39880 1505 aa36.14■■■■□ 3.38
LCN6-203ENST00000476567 RAD54L2Q9Y4B4 1467 aa36.12■■■■□ 3.37
LCN6-203ENST00000476567 AQRO60306 1485 aaKnown RBP eCLIP36.11■■■■□ 3.37
LCN6-203ENST00000476567 FGD5Q6ZNL6 1462 aa36.07■■■■□ 3.37
LCN6-203ENST00000476567 SOGA1O94964 1423 aa36.04■■■■□ 3.36
LCN6-203ENST00000476567 CHD1O14646 1710 aa35.97■■■■□ 3.35
LCN6-203ENST00000476567 TDRD9Q8NDG6 1382 aaKnown RBP35.94■■■■□ 3.34
LCN6-203ENST00000476567 TRIM41Q8WV44 630 aa35.93■■■■□ 3.34
LCN6-203ENST00000476567 WDR97A6NE52 1622 aa35.88■■■■□ 3.33
LCN6-203ENST00000476567 RIMBP3CA6NJZ7 1639 aa35.8■■■■□ 3.32
LCN6-203ENST00000476567 RIMBP3BA6NNM3 1639 aa35.8■■■■□ 3.32
LCN6-203ENST00000476567 RIMBP3Q9UFD9 1639 aa35.8■■■■□ 3.32
LCN6-203ENST00000476567 SNAPC4Q5SXM2 1469 aa35.75■■■■□ 3.31
LCN6-203ENST00000476567 FBLN2P98095 1184 aa35.72■■■■□ 3.31
LCN6-203ENST00000476567 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
LCN6-203ENST00000476567 BIVM-ERCC5R4GMW8 1640 aa35.69■■■■□ 3.3
LCN6-203ENST00000476567 ARHGEF11O15085 1522 aa35.69■■■■□ 3.3
LCN6-203ENST00000476567 GRIN2BQ13224 1484 aa35.68■■■■□ 3.3
LCN6-203ENST00000476567 ABCA10Q8WWZ4 1543 aa35.67■■■■□ 3.3
LCN6-203ENST00000476567 SYNJ1O43426 1573 aa35.67■■■■□ 3.3
LCN6-203ENST00000476567 TOP2BQ02880 1626 aa35.66■■■■□ 3.3
LCN6-203ENST00000476567 MAGI1Q96QZ7 1491 aaPredicted RBP35.64■■■■□ 3.3
LCN6-203ENST00000476567 ABCA5Q8WWZ7 1642 aa35.64■■■■□ 3.3
LCN6-203ENST00000476567 GAPVD1Q14C86 1478 aa35.63■■■■□ 3.29
LCN6-203ENST00000476567 WRNQ14191 1432 aaPredicted RBP eCLIP35.63■■■■□ 3.29
LCN6-203ENST00000476567 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
LCN6-203ENST00000476567 CHMP7Q8WUX9 453 aaPredicted RBP35.52■■■■□ 3.28
LCN6-203ENST00000476567 CLASP1Q7Z460 1538 aa35.49■■■■□ 3.27
LCN6-203ENST00000476567 ARAP1Q96P48 1450 aa35.38■■■■□ 3.25
LCN6-203ENST00000476567 CYB5RLQ6IPT4 315 aa35.35■■■■□ 3.25
LCN6-203ENST00000476567 ADAMTS12P58397 1594 aa35.33■■■■□ 3.25
LCN6-203ENST00000476567 GRIN2AQ12879 1464 aa35.25■■■■□ 3.23
LCN6-203ENST00000476567 ERICH3Q5RHP9 1530 aa35.22■■■■□ 3.23
LCN6-203ENST00000476567 FHAD1B1AJZ9 1412 aa35.17■■■■□ 3.22
LCN6-203ENST00000476567 CEP170Q5SW79 1584 aa35.17■■■■□ 3.22
LCN6-203ENST00000476567 NUP160Q12769 1436 aa35.12■■■■□ 3.21
LCN6-203ENST00000476567 ERCC6L2Q5T890 1561 aa35.02■■■■□ 3.2
LCN6-203ENST00000476567 SHROOM2Q13796 1616 aa34.97■■■■□ 3.19
LCN6-203ENST00000476567 KIF27Q86VH2 1401 aa34.89■■■■□ 3.18
LCN6-203ENST00000476567 IGF1RP08069 1367 aa34.87■■■■□ 3.17
LCN6-203ENST00000476567 CUL7Q14999 1698 aa34.82■■■■□ 3.17
LCN6-203ENST00000476567 RUSC2Q8N2Y8 1516 aa34.82■■■■□ 3.16
LCN6-203ENST00000476567 TRHP20396 242 aaPredicted RBP34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms