RNA–Protein interactions for RNA: ENST00000357396.7

CEACAM3-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,316 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-202ENST00000357396 NISCHQ9Y2I1 1504 aa48.45■■■■■ 5.35
CEACAM3-202ENST00000357396 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
CEACAM3-202ENST00000357396 ABCC9O60706 1549 aa42.27■■■■■ 4.36
CEACAM3-202ENST00000357396 RB1CC1Q8TDY2 1594 aa40.73■■■■■ 4.11
CEACAM3-202ENST00000357396 NACADO15069 1562 aa40.65■■■■■ 4.1
CEACAM3-202ENST00000357396 MYO15BQ96JP2 1530 aa40.42■■■■■ 4.06
CEACAM3-202ENST00000357396 ZCCHC6Q5VYS8 1495 aaKnown RBP40.35■■■■■ 4.05
CEACAM3-202ENST00000357396 DCAF8L2P0C7V8 631 aa40.35■■■■■ 4.05
CEACAM3-202ENST00000357396 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
CEACAM3-202ENST00000357396 UNC13AQ9UPW8 1703 aa39.82■■■■□ 3.97
CEACAM3-202ENST00000357396 BICRAQ9NZM4 1560 aa39.45■■■■□ 3.91
CEACAM3-202ENST00000357396 PABPN1Q86U42 306 aaKnown RBP eCLIP39.39■■■■□ 3.9
CEACAM3-202ENST00000357396 SCRIBQ14160 1630 aa39.32■■■■□ 3.89
CEACAM3-202ENST00000357396 SHROOM4Q9ULL8 1493 aa39.17■■■■□ 3.86
CEACAM3-202ENST00000357396 DNAJC5BQ9UF47 199 aa38.83■■■■□ 3.81
CEACAM3-202ENST00000357396 EIF4G1Q04637 1599 aaKnown RBP38.44■■■■□ 3.74
CEACAM3-202ENST00000357396 CC2D2AQ9P2K1 1620 aa38.3■■■■□ 3.72
CEACAM3-202ENST00000357396 CECR2Q9BXF3 1484 aa38.04■■■■□ 3.68
CEACAM3-202ENST00000357396 SMARCA4P51532 1647 aa37.65■■■■□ 3.62
CEACAM3-202ENST00000357396 BAZ1AQ9NRL2 1556 aaPredicted RBP37.61■■■■□ 3.61
CEACAM3-202ENST00000357396 NCAPD3P42695 1498 aa37.46■■■■□ 3.59
CEACAM3-202ENST00000357396 SMARCA2P51531 1590 aa37.46■■■■□ 3.59
CEACAM3-202ENST00000357396 ATAD2BQ9ULI0 1458 aa37.44■■■■□ 3.58
CEACAM3-202ENST00000357396 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
CEACAM3-202ENST00000357396 HMGXB3Q12766 1538 aa37.33■■■■□ 3.57
CEACAM3-202ENST00000357396 MROH2BQ7Z745 1585 aa37.29■■■■□ 3.56
CEACAM3-202ENST00000357396 BAZ1BQ9UIG0 1483 aaKnown RBP37.14■■■■□ 3.54
CEACAM3-202ENST00000357396 WIZO95785 1651 aa36.9■■■■□ 3.5
CEACAM3-202ENST00000357396 RSF1Q96T23 1441 aaPredicted RBP36.81■■■■□ 3.48
CEACAM3-202ENST00000357396 LAMC3Q9Y6N6 1575 aa36.56■■■■□ 3.44
CEACAM3-202ENST00000357396 TOP2AP11388 1531 aaKnown RBP36.55■■■■□ 3.44
CEACAM3-202ENST00000357396 NESP48681 1621 aa36.52■■■■□ 3.44
CEACAM3-202ENST00000357396 ERCC6Q03468 1493 aa36.5■■■■□ 3.43
CEACAM3-202ENST00000357396 CADPSQ9ULU8 1353 aa36.33■■■■□ 3.41
CEACAM3-202ENST00000357396 PDS5BQ9NTI5 1447 aa36.26■■■■□ 3.4
CEACAM3-202ENST00000357396 CUX2O14529 1486 aa36.22■■■■□ 3.39
CEACAM3-202ENST00000357396 KIF21AQ7Z4S6 1674 aa36.2■■■■□ 3.39
CEACAM3-202ENST00000357396 THOC2Q8NI27 1593 aaKnown RBP36.12■■■■□ 3.37
CEACAM3-202ENST00000357396 CFTRP13569 1480 aa36.12■■■■□ 3.37
CEACAM3-202ENST00000357396 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
CEACAM3-202ENST00000357396 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
CEACAM3-202ENST00000357396 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
CEACAM3-202ENST00000357396 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
CEACAM3-202ENST00000357396 MRC2Q9UBG0 1479 aa35.9■■■■□ 3.34
CEACAM3-202ENST00000357396 WDR62O43379 1518 aa35.82■■■■□ 3.32
CEACAM3-202ENST00000357396 SUPT5HO00267 1087 aaKnown RBP35.64■■■■□ 3.3
CEACAM3-202ENST00000357396 URB2Q14146 1524 aaKnown RBP35.56■■■■□ 3.28
CEACAM3-202ENST00000357396 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
CEACAM3-202ENST00000357396 TOPBP1Q92547 1522 aa35.34■■■■□ 3.25
CEACAM3-202ENST00000357396 DNMBPQ6XZF7 1577 aa35.33■■■■□ 3.25
CEACAM3-202ENST00000357396 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
CEACAM3-202ENST00000357396 DNAJC5Q9H3Z4 198 aa35.16■■■■□ 3.22
CEACAM3-202ENST00000357396 POLA1P09884 1462 aaPredicted RBP35.03■■■■□ 3.2
CEACAM3-202ENST00000357396 CUX1P39880 1505 aa35■■■■□ 3.19
CEACAM3-202ENST00000357396 TARBP1Q13395 1621 aaKnown RBP35■■■■□ 3.19
CEACAM3-202ENST00000357396 ZNF608Q9ULD9 1512 aaPredicted RBP34.96■■■■□ 3.19
CEACAM3-202ENST00000357396 FGD5Q6ZNL6 1462 aa34.91■■■■□ 3.18
CEACAM3-202ENST00000357396 EIF4G3O43432 1585 aaKnown RBP34.91■■■■□ 3.18
CEACAM3-202ENST00000357396 SOGA1O94964 1423 aa34.85■■■■□ 3.17
CEACAM3-202ENST00000357396 WDR97A6NE52 1622 aa34.83■■■■□ 3.17
CEACAM3-202ENST00000357396 RAD54L2Q9Y4B4 1467 aa34.81■■■■□ 3.16
CEACAM3-202ENST00000357396 BIVM-ERCC5R4GMW8 1640 aa34.75■■■■□ 3.15
CEACAM3-202ENST00000357396 WRNQ14191 1432 aaPredicted RBP eCLIP34.73■■■■□ 3.15
CEACAM3-202ENST00000357396 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
CEACAM3-202ENST00000357396 AQRO60306 1485 aaKnown RBP eCLIP34.73■■■■□ 3.15
CEACAM3-202ENST00000357396 SYNJ1O43426 1573 aa34.66■■■■□ 3.14
CEACAM3-202ENST00000357396 TDRD9Q8NDG6 1382 aaKnown RBP34.63■■■■□ 3.13
CEACAM3-202ENST00000357396 ABCA10Q8WWZ4 1543 aa34.61■■■■□ 3.13
CEACAM3-202ENST00000357396 OSCARQ8IYS5 282 aa34.59■■■■□ 3.13
CEACAM3-202ENST00000357396 ABCA5Q8WWZ7 1642 aa34.51■■■■□ 3.12
CEACAM3-202ENST00000357396 GRIN2BQ13224 1484 aa34.51■■■■□ 3.12
CEACAM3-202ENST00000357396 CHD1O14646 1710 aa34.5■■■■□ 3.11
CEACAM3-202ENST00000357396 PBRM1Q86U86 1689 aa34.49■■■■□ 3.11
CEACAM3-202ENST00000357396 GAPVD1Q14C86 1478 aa34.48■■■■□ 3.11
CEACAM3-202ENST00000357396 MAGI1Q96QZ7 1491 aaPredicted RBP34.47■■■■□ 3.11
CEACAM3-202ENST00000357396 SNAPC4Q5SXM2 1469 aa34.45■■■■□ 3.11
CEACAM3-202ENST00000357396 SYNJ2O15056 1496 aa34.32■■■■□ 3.08
CEACAM3-202ENST00000357396 FBLN2P98095 1184 aa34.3■■■■□ 3.08
CEACAM3-202ENST00000357396 CHMP7Q8WUX9 453 aaPredicted RBP34.23■■■■□ 3.07
CEACAM3-202ENST00000357396 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
CEACAM3-202ENST00000357396 ADAMTS12P58397 1594 aa34.18■■■■□ 3.06
CEACAM3-202ENST00000357396 CLASP1Q7Z460 1538 aa34.12■■■■□ 3.05
CEACAM3-202ENST00000357396 RIMBP3CA6NJZ7 1639 aa34.12■■■■□ 3.05
CEACAM3-202ENST00000357396 RIMBP3BA6NNM3 1639 aa34.12■■■■□ 3.05
CEACAM3-202ENST00000357396 RIMBP3Q9UFD9 1639 aa34.12■■■■□ 3.05
CEACAM3-202ENST00000357396 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
CEACAM3-202ENST00000357396 ARHGEF11O15085 1522 aa34.09■■■■□ 3.05
CEACAM3-202ENST00000357396 GRIN2AQ12879 1464 aa34.06■■■■□ 3.04
CEACAM3-202ENST00000357396 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
CEACAM3-202ENST00000357396 NUP160Q12769 1436 aa33.92■■■■□ 3.02
CEACAM3-202ENST00000357396 CUL7Q14999 1698 aa33.92■■■■□ 3.02
CEACAM3-202ENST00000357396 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
CEACAM3-202ENST00000357396 TRIM41Q8WV44 630 aa33.88■■■■□ 3.01
CEACAM3-202ENST00000357396 IGF1RP08069 1367 aa33.86■■■■□ 3.01
CEACAM3-202ENST00000357396 ARAP1Q96P48 1450 aa33.79■■■■□ 3
CEACAM3-202ENST00000357396 SHROOM2Q13796 1616 aa33.73■■■□□ 2.99
CEACAM3-202ENST00000357396 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
CEACAM3-202ENST00000357396 CYB5RLQ6IPT4 315 aa33.68■■■□□ 2.98
CEACAM3-202ENST00000357396 CARMIL1Q5VZK9 1371 aa33.67■■■□□ 2.98
CEACAM3-202ENST00000357396 KIAA0586Q9BVV6 1533 aa33.56■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms