Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.66■□□□□ 0.26
SFTPBP07988 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 KRT18P29-201ENST00000397031 1267 ntBASIC16.66■□□□□ 0.26
SFTPBP07988 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.66■□□□□ 0.26
SFTPBP07988 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SFTPBP07988 LETM1P2-201ENST00000597330 2178 ntBASIC16.66■□□□□ 0.26
SFTPBP07988 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SFTPBP07988 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
SFTPBP07988 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SFTPBP07988 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SFTPBP07988 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.65■□□□□ 0.26
SFTPBP07988 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 PNMA6B-201ENST00000538162 1200 ntBASIC16.65■□□□□ 0.26
SFTPBP07988 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SFTPBP07988 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.65■□□□□ 0.26
SFTPBP07988 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 ITM2C-210ENST00000620962 501 ntBASIC16.65■□□□□ 0.26
SFTPBP07988 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.65■□□□□ 0.26
SFTPBP07988 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.65■□□□□ 0.26
SFTPBP07988 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SFTPBP07988 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.65■□□□□ 0.26
SFTPBP07988 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SFTPBP07988 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 AL390719.1-204ENST00000412397 1219 ntBASIC16.64■□□□□ 0.25
SFTPBP07988 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 AP003097.1-201ENST00000530657 1135 ntBASIC16.64■□□□□ 0.25
SFTPBP07988 AC005829.2-201ENST00000571422 1056 ntBASIC16.64■□□□□ 0.25
SFTPBP07988 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.64■□□□□ 0.25
SFTPBP07988 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 AC006058.3-201ENST00000606217 1069 ntBASIC16.64■□□□□ 0.25
SFTPBP07988 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SFTPBP07988 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SFTPBP07988 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.64■□□□□ 0.25
SFTPBP07988 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SFTPBP07988 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 559.5 ms