RNA–Protein interactions for RNA: ENST00000606217.1

AC006058.3-201, humanhuman

BASIC

Gene AC006058.3, Length 1,069 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006058.3-201ENST00000606217 NISCHQ9Y2I1 1504 aa49.86■■■■■ 5.57
AC006058.3-201ENST00000606217 CCDC180Q9P1Z9 1646 aa44.65■■■■■ 4.74
AC006058.3-201ENST00000606217 ABCC9O60706 1549 aa44.51■■■■■ 4.72
AC006058.3-201ENST00000606217 RB1CC1Q8TDY2 1594 aa42.43■■■■■ 4.38
AC006058.3-201ENST00000606217 NACADO15069 1562 aa42.16■■■■■ 4.34
AC006058.3-201ENST00000606217 DCAF8L2P0C7V8 631 aa42.1■■■■■ 4.33
AC006058.3-201ENST00000606217 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
AC006058.3-201ENST00000606217 DNAJC5BQ9UF47 199 aa41.53■■■■■ 4.24
AC006058.3-201ENST00000606217 PABPN1Q86U42 306 aaKnown RBP eCLIP41.48■■■■■ 4.23
AC006058.3-201ENST00000606217 UNC13AQ9UPW8 1703 aa41.47■■■■■ 4.23
AC006058.3-201ENST00000606217 ZCCHC6Q5VYS8 1495 aaKnown RBP41.36■■■■■ 4.21
AC006058.3-201ENST00000606217 BICRAQ9NZM4 1560 aa41.17■■■■■ 4.18
AC006058.3-201ENST00000606217 DCAF1Q9Y4B6 1507 aa41.16■■■■■ 4.18
AC006058.3-201ENST00000606217 SCRIBQ14160 1630 aa40.76■■■■■ 4.12
AC006058.3-201ENST00000606217 SHROOM4Q9ULL8 1493 aa40.59■■■■■ 4.09
AC006058.3-201ENST00000606217 CC2D2AQ9P2K1 1620 aa40.19■■■■■ 4.02
AC006058.3-201ENST00000606217 EIF4G1Q04637 1599 aaKnown RBP40.15■■■■■ 4.02
AC006058.3-201ENST00000606217 CECR2Q9BXF3 1484 aa40.05■■■■■ 4
AC006058.3-201ENST00000606217 NCAPD3P42695 1498 aa38.91■■■■□ 3.82
AC006058.3-201ENST00000606217 SMARCA4P51532 1647 aa38.87■■■■□ 3.81
AC006058.3-201ENST00000606217 ATAD2BQ9ULI0 1458 aa38.84■■■■□ 3.81
AC006058.3-201ENST00000606217 SMARCA2P51531 1590 aa38.75■■■■□ 3.79
AC006058.3-201ENST00000606217 BAZ1AQ9NRL2 1556 aaPredicted RBP38.7■■■■□ 3.79
AC006058.3-201ENST00000606217 HMGXB3Q12766 1538 aa38.65■■■■□ 3.78
AC006058.3-201ENST00000606217 BAZ1BQ9UIG0 1483 aaKnown RBP38.51■■■■□ 3.76
AC006058.3-201ENST00000606217 MROH2BQ7Z745 1585 aa38.44■■■■□ 3.74
AC006058.3-201ENST00000606217 PEG3Q9GZU2 1588 aa38.44■■■■□ 3.74
AC006058.3-201ENST00000606217 ERCC6Q03468 1493 aa38.43■■■■□ 3.74
AC006058.3-201ENST00000606217 NESP48681 1621 aa38.29■■■■□ 3.72
AC006058.3-201ENST00000606217 CUX2O14529 1486 aa38.23■■■■□ 3.71
AC006058.3-201ENST00000606217 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
AC006058.3-201ENST00000606217 WIZO95785 1651 aa38.01■■■■□ 3.67
AC006058.3-201ENST00000606217 DNAJC5Q9H3Z4 198 aa37.98■■■■□ 3.67
AC006058.3-201ENST00000606217 THOC2Q8NI27 1593 aaKnown RBP37.84■■■■□ 3.65
AC006058.3-201ENST00000606217 KIF21AQ7Z4S6 1674 aa37.81■■■■□ 3.64
AC006058.3-201ENST00000606217 PDS5BQ9NTI5 1447 aa37.8■■■■□ 3.64
AC006058.3-201ENST00000606217 CADPSQ9ULU8 1353 aa37.76■■■■□ 3.64
AC006058.3-201ENST00000606217 RSF1Q96T23 1441 aaPredicted RBP37.71■■■■□ 3.63
AC006058.3-201ENST00000606217 TOP2AP11388 1531 aaKnown RBP37.52■■■■□ 3.6
AC006058.3-201ENST00000606217 MRC2Q9UBG0 1479 aa37.47■■■■□ 3.59
AC006058.3-201ENST00000606217 CEP164Q9UPV0 1460 aa37.38■■■■□ 3.57
AC006058.3-201ENST00000606217 CFTRP13569 1480 aa37.36■■■■□ 3.57
AC006058.3-201ENST00000606217 WDR62O43379 1518 aa37.36■■■■□ 3.57
AC006058.3-201ENST00000606217 FANCD2Q9BXW9 1451 aa37.35■■■■□ 3.57
AC006058.3-201ENST00000606217 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
AC006058.3-201ENST00000606217 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
AC006058.3-201ENST00000606217 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
AC006058.3-201ENST00000606217 TOPBP1Q92547 1522 aa36.66■■■■□ 3.46
AC006058.3-201ENST00000606217 IFT140Q96RY7 1462 aa36.6■■■■□ 3.45
AC006058.3-201ENST00000606217 ABCC8Q09428 1581 aa36.57■■■■□ 3.45
AC006058.3-201ENST00000606217 ZNF608Q9ULD9 1512 aaPredicted RBP36.54■■■■□ 3.44
AC006058.3-201ENST00000606217 DNMBPQ6XZF7 1577 aa36.54■■■■□ 3.44
AC006058.3-201ENST00000606217 OSCARQ8IYS5 282 aa36.54■■■■□ 3.44
AC006058.3-201ENST00000606217 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
AC006058.3-201ENST00000606217 EIF4G3O43432 1585 aaKnown RBP36.36■■■■□ 3.41
AC006058.3-201ENST00000606217 TARBP1Q13395 1621 aaKnown RBP36.32■■■■□ 3.4
AC006058.3-201ENST00000606217 POLA1P09884 1462 aaPredicted RBP36.3■■■■□ 3.4
AC006058.3-201ENST00000606217 SUPT5HO00267 1087 aaKnown RBP36.28■■■■□ 3.4
AC006058.3-201ENST00000606217 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.39
AC006058.3-201ENST00000606217 RAD54L2Q9Y4B4 1467 aa36.18■■■■□ 3.38
AC006058.3-201ENST00000606217 SOGA1O94964 1423 aa36.15■■■■□ 3.38
AC006058.3-201ENST00000606217 FGD5Q6ZNL6 1462 aa36.11■■■■□ 3.37
AC006058.3-201ENST00000606217 CUX1P39880 1505 aa36.11■■■■□ 3.37
AC006058.3-201ENST00000606217 CHD1O14646 1710 aa36.06■■■■□ 3.36
AC006058.3-201ENST00000606217 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
AC006058.3-201ENST00000606217 RIMBP3CA6NJZ7 1639 aa36.05■■■■□ 3.36
AC006058.3-201ENST00000606217 RIMBP3BA6NNM3 1639 aa36.05■■■■□ 3.36
AC006058.3-201ENST00000606217 RIMBP3Q9UFD9 1639 aa36.05■■■■□ 3.36
AC006058.3-201ENST00000606217 FBLN2P98095 1184 aa36.02■■■■□ 3.36
AC006058.3-201ENST00000606217 ARHGEF11O15085 1522 aa35.96■■■■□ 3.35
AC006058.3-201ENST00000606217 WDR97A6NE52 1622 aa35.93■■■■□ 3.34
AC006058.3-201ENST00000606217 SNAPC4Q5SXM2 1469 aa35.88■■■■□ 3.33
AC006058.3-201ENST00000606217 GRIN2BQ13224 1484 aa35.8■■■■□ 3.32
AC006058.3-201ENST00000606217 MAGI1Q96QZ7 1491 aaPredicted RBP35.77■■■■□ 3.32
AC006058.3-201ENST00000606217 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
AC006058.3-201ENST00000606217 GAPVD1Q14C86 1478 aa35.72■■■■□ 3.31
AC006058.3-201ENST00000606217 CYB5RLQ6IPT4 315 aa35.71■■■■□ 3.31
AC006058.3-201ENST00000606217 PBRM1Q86U86 1689 aa35.7■■■■□ 3.31
AC006058.3-201ENST00000606217 ABCA10Q8WWZ4 1543 aa35.68■■■■□ 3.3
AC006058.3-201ENST00000606217 SYNJ2O15056 1496 aa35.66■■■■□ 3.3
AC006058.3-201ENST00000606217 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
AC006058.3-201ENST00000606217 ABCA5Q8WWZ7 1642 aa35.62■■■■□ 3.29
AC006058.3-201ENST00000606217 CLASP1Q7Z460 1538 aa35.62■■■■□ 3.29
AC006058.3-201ENST00000606217 ARAP1Q96P48 1450 aa35.61■■■■□ 3.29
AC006058.3-201ENST00000606217 WRNQ14191 1432 aaPredicted RBP eCLIP35.61■■■■□ 3.29
AC006058.3-201ENST00000606217 BIVM-ERCC5R4GMW8 1640 aa35.58■■■■□ 3.29
AC006058.3-201ENST00000606217 TOP2BQ02880 1626 aa35.57■■■■□ 3.29
AC006058.3-201ENST00000606217 ADAMTS12P58397 1594 aa35.36■■■■□ 3.25
AC006058.3-201ENST00000606217 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
AC006058.3-201ENST00000606217 TRHP20396 242 aaPredicted RBP35.28■■■■□ 3.24
AC006058.3-201ENST00000606217 FHAD1B1AJZ9 1412 aa35.25■■■■□ 3.23
AC006058.3-201ENST00000606217 ERICH3Q5RHP9 1530 aa35.25■■■■□ 3.23
AC006058.3-201ENST00000606217 CEP170Q5SW79 1584 aa35.21■■■■□ 3.23
AC006058.3-201ENST00000606217 NUP160Q12769 1436 aa35.19■■■■□ 3.22
AC006058.3-201ENST00000606217 ERCC6L2Q5T890 1561 aa35.11■■■■□ 3.21
AC006058.3-201ENST00000606217 SHROOM2Q13796 1616 aa35.02■■■■□ 3.2
AC006058.3-201ENST00000606217 KIF27Q86VH2 1401 aa34.9■■■■□ 3.18
AC006058.3-201ENST00000606217 PRG4Q92954 1404 aaPredicted RBP34.88■■■■□ 3.17
AC006058.3-201ENST00000606217 RUSC2Q8N2Y8 1516 aa34.86■■■■□ 3.17
AC006058.3-201ENST00000606217 JPH4Q96JJ6 628 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms