Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHCBP1LQ9BZQ2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.18■□□□□ 0.66
SHCBP1LQ9BZQ2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 LINC01465-201ENST00000408887 1940 ntBASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 AC005332.8-201ENST00000622750 2735 ntBASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 AL589743.5-201ENST00000616611 1050 ntBASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.17■□□□□ 0.66
SHCBP1LQ9BZQ2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 OR10C1-204ENST00000622521 1039 ntBASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 AC005082.1-201ENST00000413042 2259 ntBASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHCBP1LQ9BZQ2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 AC104581.1-202ENST00000635932 2618 ntBASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 LETM1P2-201ENST00000597330 2178 ntBASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHCBP1LQ9BZQ2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHCBP1LQ9BZQ2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHCBP1LQ9BZQ2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHCBP1LQ9BZQ2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.14■□□□□ 0.66
SHCBP1LQ9BZQ2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHCBP1LQ9BZQ2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHCBP1LQ9BZQ2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms