RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 NISCHQ9Y2I1 1504 aa48.12■■■■■ 5.29
TSSC4-207ENST00000451491 CCDC180Q9P1Z9 1646 aa42.6■■■■■ 4.41
TSSC4-207ENST00000451491 ABCC9O60706 1549 aa41.17■■■■■ 4.18
TSSC4-207ENST00000451491 ZCCHC6Q5VYS8 1495 aaKnown RBP40.19■■■■■ 4.03
TSSC4-207ENST00000451491 DCAF8L2P0C7V8 631 aa39.94■■■■□ 3.98
TSSC4-207ENST00000451491 NACADO15069 1562 aa39.91■■■■□ 3.98
TSSC4-207ENST00000451491 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
TSSC4-207ENST00000451491 MYO15BQ96JP2 1530 aa39.85■■■■□ 3.97
TSSC4-207ENST00000451491 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
TSSC4-207ENST00000451491 UNC13AQ9UPW8 1703 aa39■■■■□ 3.83
TSSC4-207ENST00000451491 SCRIBQ14160 1630 aa38.88■■■■□ 3.81
TSSC4-207ENST00000451491 BICRAQ9NZM4 1560 aa38.63■■■■□ 3.78
TSSC4-207ENST00000451491 PABPN1Q86U42 306 aaKnown RBP eCLIP38.53■■■■□ 3.76
TSSC4-207ENST00000451491 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
TSSC4-207ENST00000451491 EIF4G1Q04637 1599 aaKnown RBP37.56■■■■□ 3.6
TSSC4-207ENST00000451491 CECR2Q9BXF3 1484 aa37.43■■■■□ 3.58
TSSC4-207ENST00000451491 DNAJC5BQ9UF47 199 aa37.35■■■■□ 3.57
TSSC4-207ENST00000451491 CC2D2AQ9P2K1 1620 aa37.29■■■■□ 3.56
TSSC4-207ENST00000451491 BAZ1AQ9NRL2 1556 aaPredicted RBP37.27■■■■□ 3.56
TSSC4-207ENST00000451491 SMARCA4P51532 1647 aa37.25■■■■□ 3.55
TSSC4-207ENST00000451491 MROH2BQ7Z745 1585 aa37.1■■■■□ 3.53
TSSC4-207ENST00000451491 ATAD2BQ9ULI0 1458 aa36.91■■■■□ 3.5
TSSC4-207ENST00000451491 SMARCA2P51531 1590 aa36.89■■■■□ 3.5
TSSC4-207ENST00000451491 PEG3Q9GZU2 1588 aa36.89■■■■□ 3.5
TSSC4-207ENST00000451491 RSF1Q96T23 1441 aaPredicted RBP36.84■■■■□ 3.49
TSSC4-207ENST00000451491 NCAPD3P42695 1498 aa36.82■■■■□ 3.49
TSSC4-207ENST00000451491 WIZO95785 1651 aa36.74■■■■□ 3.47
TSSC4-207ENST00000451491 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
TSSC4-207ENST00000451491 BAZ1BQ9UIG0 1483 aaKnown RBP36.62■■■■□ 3.45
TSSC4-207ENST00000451491 TOP2AP11388 1531 aaKnown RBP36.36■■■■□ 3.41
TSSC4-207ENST00000451491 SUPT5HO00267 1087 aaKnown RBP36.22■■■■□ 3.39
TSSC4-207ENST00000451491 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
TSSC4-207ENST00000451491 NESP48681 1621 aa35.78■■■■□ 3.32
TSSC4-207ENST00000451491 LAMC3Q9Y6N6 1575 aa35.78■■■■□ 3.32
TSSC4-207ENST00000451491 CADPSQ9ULU8 1353 aa35.76■■■■□ 3.31
TSSC4-207ENST00000451491 CFTRP13569 1480 aa35.66■■■■□ 3.3
TSSC4-207ENST00000451491 PDS5BQ9NTI5 1447 aa35.5■■■■□ 3.27
TSSC4-207ENST00000451491 PRDM2Q13029 1718 aa35.49■■■■□ 3.27
TSSC4-207ENST00000451491 ERCC6Q03468 1493 aa35.43■■■■□ 3.26
TSSC4-207ENST00000451491 KIF21AQ7Z4S6 1674 aa35.4■■■■□ 3.26
TSSC4-207ENST00000451491 FANCD2Q9BXW9 1451 aa35.35■■■■□ 3.25
TSSC4-207ENST00000451491 CEP164Q9UPV0 1460 aa35.26■■■■□ 3.24
TSSC4-207ENST00000451491 THOC2Q8NI27 1593 aaKnown RBP35.16■■■■□ 3.22
TSSC4-207ENST00000451491 MRC2Q9UBG0 1479 aa35.11■■■■□ 3.21
TSSC4-207ENST00000451491 WDR62O43379 1518 aa34.99■■■■□ 3.19
TSSC4-207ENST00000451491 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
TSSC4-207ENST00000451491 CUX2O14529 1486 aa34.9■■■■□ 3.18
TSSC4-207ENST00000451491 ABCC8Q09428 1581 aa34.87■■■■□ 3.17
TSSC4-207ENST00000451491 DNMBPQ6XZF7 1577 aa34.85■■■■□ 3.17
TSSC4-207ENST00000451491 TOPBP1Q92547 1522 aa34.85■■■■□ 3.17
TSSC4-207ENST00000451491 CUX1P39880 1505 aa34.78■■■■□ 3.16
TSSC4-207ENST00000451491 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
TSSC4-207ENST00000451491 SYNJ1O43426 1573 aa34.62■■■■□ 3.13
TSSC4-207ENST00000451491 TOP2BQ02880 1626 aa34.62■■■■□ 3.13
TSSC4-207ENST00000451491 BIVM-ERCC5R4GMW8 1640 aa34.62■■■■□ 3.13
TSSC4-207ENST00000451491 POLA1P09884 1462 aaPredicted RBP34.59■■■■□ 3.13
TSSC4-207ENST00000451491 FGD5Q6ZNL6 1462 aa34.57■■■■□ 3.12
TSSC4-207ENST00000451491 IFT140Q96RY7 1462 aa34.49■■■■□ 3.11
TSSC4-207ENST00000451491 TARBP1Q13395 1621 aaKnown RBP34.46■■■■□ 3.11
TSSC4-207ENST00000451491 SOGA1O94964 1423 aa34.44■■■■□ 3.1
TSSC4-207ENST00000451491 RAD54L2Q9Y4B4 1467 aa34.42■■■■□ 3.1
TSSC4-207ENST00000451491 ZNF608Q9ULD9 1512 aaPredicted RBP34.31■■■■□ 3.08
TSSC4-207ENST00000451491 WDR97A6NE52 1622 aa34.3■■■■□ 3.08
TSSC4-207ENST00000451491 ABCA10Q8WWZ4 1543 aa34.28■■■■□ 3.08
TSSC4-207ENST00000451491 EIF4G3O43432 1585 aaKnown RBP34.22■■■■□ 3.07
TSSC4-207ENST00000451491 TRIM41Q8WV44 630 aa34.2■■■■□ 3.06
TSSC4-207ENST00000451491 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
TSSC4-207ENST00000451491 AQRO60306 1485 aaKnown RBP eCLIP34.17■■■■□ 3.06
TSSC4-207ENST00000451491 CHIC1Q5VXU3 224 aa34.12■■■■□ 3.05
TSSC4-207ENST00000451491 ABCA5Q8WWZ7 1642 aa34.1■■■■□ 3.05
TSSC4-207ENST00000451491 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
TSSC4-207ENST00000451491 PBRM1Q86U86 1689 aa33.99■■■■□ 3.03
TSSC4-207ENST00000451491 GRIN2BQ13224 1484 aa33.98■■■■□ 3.03
TSSC4-207ENST00000451491 KIF27Q86VH2 1401 aa33.94■■■■□ 3.02
TSSC4-207ENST00000451491 ERICH3Q5RHP9 1530 aa33.87■■■■□ 3.01
TSSC4-207ENST00000451491 SNAPC4Q5SXM2 1469 aa33.87■■■■□ 3.01
TSSC4-207ENST00000451491 MAGI1Q96QZ7 1491 aaPredicted RBP33.85■■■■□ 3.01
TSSC4-207ENST00000451491 RUSC2Q8N2Y8 1516 aa33.8■■■■□ 3
TSSC4-207ENST00000451491 IGF1RP08069 1367 aa33.75■■■□□ 2.99
TSSC4-207ENST00000451491 ADAMTS12P58397 1594 aa33.74■■■□□ 2.99
TSSC4-207ENST00000451491 CHD1O14646 1710 aa33.71■■■□□ 2.99
TSSC4-207ENST00000451491 SYNJ2O15056 1496 aa33.71■■■□□ 2.99
TSSC4-207ENST00000451491 FHAD1B1AJZ9 1412 aa33.68■■■□□ 2.98
TSSC4-207ENST00000451491 CUL7Q14999 1698 aa33.67■■■□□ 2.98
TSSC4-207ENST00000451491 EEA1Q15075 1411 aa33.63■■■□□ 2.97
TSSC4-207ENST00000451491 FBLN2P98095 1184 aa33.62■■■□□ 2.97
TSSC4-207ENST00000451491 CHMP7Q8WUX9 453 aaPredicted RBP33.62■■■□□ 2.97
TSSC4-207ENST00000451491 CARMIL1Q5VZK9 1371 aa33.56■■■□□ 2.96
TSSC4-207ENST00000451491 GRIN2AQ12879 1464 aa33.56■■■□□ 2.96
TSSC4-207ENST00000451491 OSCARQ8IYS5 282 aa33.53■■■□□ 2.96
TSSC4-207ENST00000451491 CSRNP3Q8WYN3 585 aa33.5■■■□□ 2.95
TSSC4-207ENST00000451491 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
TSSC4-207ENST00000451491 FAM9AQ8IZU1 332 aaPredicted RBP33.46■■■□□ 2.95
TSSC4-207ENST00000451491 PRXQ9BXM0 1461 aa33.43■■■□□ 2.94
TSSC4-207ENST00000451491 RAPGEF2Q9Y4G8 1499 aa33.43■■■□□ 2.94
TSSC4-207ENST00000451491 NUP160Q12769 1436 aa33.39■■■□□ 2.94
TSSC4-207ENST00000451491 CEP170Q5SW79 1584 aa33.38■■■□□ 2.93
TSSC4-207ENST00000451491 CLASP1Q7Z460 1538 aa33.34■■■□□ 2.93
TSSC4-207ENST00000451491 KIF21BO75037 1637 aa33.27■■■□□ 2.92
TSSC4-207ENST00000451491 KIAA0586Q9BVV6 1533 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms