RNA–Protein interactions for RNA: ENST00000318317.8

LRR1-202, Transcript of leucine rich repeat protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRR1, Length 957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRR1-202ENST00000318317 NISCHQ9Y2I1 1504 aa48.32■■■■■ 5.33
LRR1-202ENST00000318317 CCDC180Q9P1Z9 1646 aa42.66■■■■■ 4.42
LRR1-202ENST00000318317 ABCC9O60706 1549 aa41.39■■■■■ 4.22
LRR1-202ENST00000318317 ZCCHC6Q5VYS8 1495 aaKnown RBP40.32■■■■■ 4.05
LRR1-202ENST00000318317 DCAF8L2P0C7V8 631 aa40.17■■■■■ 4.02
LRR1-202ENST00000318317 NACADO15069 1562 aa40.06■■■■■ 4
LRR1-202ENST00000318317 MYO15BQ96JP2 1530 aa40.01■■■■□ 3.99
LRR1-202ENST00000318317 DCAF1Q9Y4B6 1507 aa40.01■■■■□ 3.99
LRR1-202ENST00000318317 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
LRR1-202ENST00000318317 UNC13AQ9UPW8 1703 aa39.06■■■■□ 3.84
LRR1-202ENST00000318317 SCRIBQ14160 1630 aa38.96■■■■□ 3.83
LRR1-202ENST00000318317 BICRAQ9NZM4 1560 aa38.83■■■■□ 3.81
LRR1-202ENST00000318317 PABPN1Q86U42 306 aaKnown RBP eCLIP38.82■■■■□ 3.8
LRR1-202ENST00000318317 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
LRR1-202ENST00000318317 DNAJC5BQ9UF47 199 aa37.76■■■■□ 3.64
LRR1-202ENST00000318317 EIF4G1Q04637 1599 aaKnown RBP37.71■■■■□ 3.63
LRR1-202ENST00000318317 CECR2Q9BXF3 1484 aa37.64■■■■□ 3.62
LRR1-202ENST00000318317 CC2D2AQ9P2K1 1620 aa37.44■■■■□ 3.58
LRR1-202ENST00000318317 BAZ1AQ9NRL2 1556 aaPredicted RBP37.36■■■■□ 3.57
LRR1-202ENST00000318317 SMARCA4P51532 1647 aa37.35■■■■□ 3.57
LRR1-202ENST00000318317 MROH2BQ7Z745 1585 aa37.26■■■■□ 3.56
LRR1-202ENST00000318317 ATAD2BQ9ULI0 1458 aa37.1■■■■□ 3.53
LRR1-202ENST00000318317 NCAPD3P42695 1498 aa37.03■■■■□ 3.52
LRR1-202ENST00000318317 RSF1Q96T23 1441 aaPredicted RBP37.02■■■■□ 3.52
LRR1-202ENST00000318317 PEG3Q9GZU2 1588 aa37.02■■■■□ 3.52
LRR1-202ENST00000318317 SMARCA2P51531 1590 aa37■■■■□ 3.51
LRR1-202ENST00000318317 WIZO95785 1651 aa36.83■■■■□ 3.49
LRR1-202ENST00000318317 HMGXB3Q12766 1538 aa36.8■■■■□ 3.48
LRR1-202ENST00000318317 BAZ1BQ9UIG0 1483 aaKnown RBP36.75■■■■□ 3.47
LRR1-202ENST00000318317 TOP2AP11388 1531 aaKnown RBP36.45■■■■□ 3.43
LRR1-202ENST00000318317 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
LRR1-202ENST00000318317 CCDC88BA6NC98 1476 aa36.1■■■■□ 3.37
LRR1-202ENST00000318317 NESP48681 1621 aa35.98■■■■□ 3.35
LRR1-202ENST00000318317 CADPSQ9ULU8 1353 aa35.97■■■■□ 3.35
LRR1-202ENST00000318317 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
LRR1-202ENST00000318317 CFTRP13569 1480 aa35.84■■■■□ 3.33
LRR1-202ENST00000318317 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
LRR1-202ENST00000318317 ERCC6Q03468 1493 aa35.56■■■■□ 3.28
LRR1-202ENST00000318317 FANCD2Q9BXW9 1451 aa35.5■■■■□ 3.27
LRR1-202ENST00000318317 KIF21AQ7Z4S6 1674 aa35.47■■■■□ 3.27
LRR1-202ENST00000318317 PRDM2Q13029 1718 aa35.44■■■■□ 3.26
LRR1-202ENST00000318317 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
LRR1-202ENST00000318317 THOC2Q8NI27 1593 aaKnown RBP35.27■■■■□ 3.24
LRR1-202ENST00000318317 MRC2Q9UBG0 1479 aa35.26■■■■□ 3.23
LRR1-202ENST00000318317 URB2Q14146 1524 aaKnown RBP35.16■■■■□ 3.22
LRR1-202ENST00000318317 WDR62O43379 1518 aa35.12■■■■□ 3.21
LRR1-202ENST00000318317 CUX2O14529 1486 aa35.08■■■■□ 3.21
LRR1-202ENST00000318317 ABCC8Q09428 1581 aa35■■■■□ 3.19
LRR1-202ENST00000318317 TOPBP1Q92547 1522 aa34.99■■■■□ 3.19
LRR1-202ENST00000318317 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
LRR1-202ENST00000318317 CUX1P39880 1505 aa34.91■■■■□ 3.18
LRR1-202ENST00000318317 WRNQ14191 1432 aaPredicted RBP eCLIP34.83■■■■□ 3.17
LRR1-202ENST00000318317 POLA1P09884 1462 aaPredicted RBP34.73■■■■□ 3.15
LRR1-202ENST00000318317 SYNJ1O43426 1573 aa34.72■■■■□ 3.15
LRR1-202ENST00000318317 FGD5Q6ZNL6 1462 aa34.7■■■■□ 3.15
LRR1-202ENST00000318317 TOP2BQ02880 1626 aa34.7■■■■□ 3.14
LRR1-202ENST00000318317 BIVM-ERCC5R4GMW8 1640 aa34.66■■■■□ 3.14
LRR1-202ENST00000318317 IFT140Q96RY7 1462 aa34.65■■■■□ 3.14
LRR1-202ENST00000318317 SOGA1O94964 1423 aa34.62■■■■□ 3.13
LRR1-202ENST00000318317 RAD54L2Q9Y4B4 1467 aa34.6■■■■□ 3.13
LRR1-202ENST00000318317 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
LRR1-202ENST00000318317 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
LRR1-202ENST00000318317 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
LRR1-202ENST00000318317 TDRD9Q8NDG6 1382 aaKnown RBP34.38■■■■□ 3.09
LRR1-202ENST00000318317 AQRO60306 1485 aaKnown RBP eCLIP34.37■■■■□ 3.094e-6■■■□□ 17.6
LRR1-202ENST00000318317 WDR97A6NE52 1622 aa34.34■■■■□ 3.09
LRR1-202ENST00000318317 TRIM41Q8WV44 630 aa34.33■■■■□ 3.09
LRR1-202ENST00000318317 CHIC1Q5VXU3 224 aa34.3■■■■□ 3.08
LRR1-202ENST00000318317 EIF4G3O43432 1585 aaKnown RBP34.28■■■■□ 3.08
LRR1-202ENST00000318317 GAPVD1Q14C86 1478 aa34.2■■■■□ 3.06
LRR1-202ENST00000318317 ABCA5Q8WWZ7 1642 aa34.18■■■■□ 3.06
LRR1-202ENST00000318317 GRIN2BQ13224 1484 aa34.12■■■■□ 3.05
LRR1-202ENST00000318317 KIF27Q86VH2 1401 aa34.05■■■■□ 3.04
LRR1-202ENST00000318317 PBRM1Q86U86 1689 aa34■■■■□ 3.03
LRR1-202ENST00000318317 SNAPC4Q5SXM2 1469 aa34■■■■□ 3.03
LRR1-202ENST00000318317 RUSC2Q8N2Y8 1516 aa33.98■■■■□ 3.03
LRR1-202ENST00000318317 IGF1RP08069 1367 aa33.98■■■■□ 3.03
LRR1-202ENST00000318317 MAGI1Q96QZ7 1491 aaPredicted RBP33.97■■■■□ 3.03
LRR1-202ENST00000318317 ERICH3Q5RHP9 1530 aa33.97■■■■□ 3.03
LRR1-202ENST00000318317 SYNJ2O15056 1496 aa33.85■■■■□ 3.01
LRR1-202ENST00000318317 FHAD1B1AJZ9 1412 aa33.82■■■■□ 3
LRR1-202ENST00000318317 CHMP7Q8WUX9 453 aaPredicted RBP33.82■■■■□ 3
LRR1-202ENST00000318317 FBLN2P98095 1184 aa33.81■■■■□ 3
LRR1-202ENST00000318317 ADAMTS12P58397 1594 aa33.81■■■■□ 3
LRR1-202ENST00000318317 OSCARQ8IYS5 282 aa33.78■■■■□ 3
LRR1-202ENST00000318317 CHD1O14646 1710 aa33.76■■■□□ 2.99
LRR1-202ENST00000318317 CARMIL1Q5VZK9 1371 aa33.72■■■□□ 2.99
LRR1-202ENST00000318317 EEA1Q15075 1411 aa33.7■■■□□ 2.98
LRR1-202ENST00000318317 CUL7Q14999 1698 aa33.68■■■□□ 2.98
LRR1-202ENST00000318317 CSRNP3Q8WYN3 585 aa33.68■■■□□ 2.98
LRR1-202ENST00000318317 GRIN2AQ12879 1464 aa33.68■■■□□ 2.98
LRR1-202ENST00000318317 FAM9AQ8IZU1 332 aaPredicted RBP33.61■■■□□ 2.97
LRR1-202ENST00000318317 DNAJC5Q9H3Z4 198 aa33.61■■■□□ 2.97
LRR1-202ENST00000318317 PRXQ9BXM0 1461 aa33.57■■■□□ 2.97
LRR1-202ENST00000318317 NUP160Q12769 1436 aa33.56■■■□□ 2.96
LRR1-202ENST00000318317 RAPGEF2Q9Y4G8 1499 aa33.54■■■□□ 2.96
LRR1-202ENST00000318317 CEP170Q5SW79 1584 aa33.5■■■□□ 2.95
LRR1-202ENST00000318317 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
LRR1-202ENST00000318317 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
LRR1-202ENST00000318317 KIF21BO75037 1637 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms