RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 NISCHQ9Y2I1 1504 aa42.43■■■■■ 4.38
CHMP6-201ENST00000325167 CCDC180Q9P1Z9 1646 aa36.82■■■■□ 3.48
CHMP6-201ENST00000325167 ABCC9O60706 1549 aa36.37■■■■□ 3.41
CHMP6-201ENST00000325167 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
CHMP6-201ENST00000325167 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
CHMP6-201ENST00000325167 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
CHMP6-201ENST00000325167 DCAF8L2P0C7V8 631 aa34.79■■■■□ 3.16
CHMP6-201ENST00000325167 RB1CC1Q8TDY2 1594 aa34.69■■■■□ 3.14
CHMP6-201ENST00000325167 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
CHMP6-201ENST00000325167 NACADO15069 1562 aa34.51■■■■□ 3.12
CHMP6-201ENST00000325167 UNC13AQ9UPW8 1703 aa33.98■■■■□ 3.03
CHMP6-201ENST00000325167 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
CHMP6-201ENST00000325167 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
CHMP6-201ENST00000325167 SCRIBQ14160 1630 aa33.8■■■■□ 3
CHMP6-201ENST00000325167 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
CHMP6-201ENST00000325167 BICRAQ9NZM4 1560 aa33.7■■■□□ 2.99
CHMP6-201ENST00000325167 RSF1Q96T23 1441 aaPredicted RBP33.09■■■□□ 2.89
CHMP6-201ENST00000325167 EIF4G1Q04637 1599 aaKnown RBP32.84■■■□□ 2.85
CHMP6-201ENST00000325167 CC2D2AQ9P2K1 1620 aa32.84■■■□□ 2.85
CHMP6-201ENST00000325167 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
CHMP6-201ENST00000325167 BAZ1AQ9NRL2 1556 aaPredicted RBP32.77■■■□□ 2.84
CHMP6-201ENST00000325167 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
CHMP6-201ENST00000325167 CHIC1Q5VXU3 224 aa32.66■■■□□ 2.82
CHMP6-201ENST00000325167 SMARCA4P51532 1647 aa32.5■■■□□ 2.79
CHMP6-201ENST00000325167 WIZO95785 1651 aa32.46■■■□□ 2.79
CHMP6-201ENST00000325167 TOP2AP11388 1531 aaKnown RBP32.25■■■□□ 2.75
CHMP6-201ENST00000325167 PEG3Q9GZU2 1588 aa32.14■■■□□ 2.74
CHMP6-201ENST00000325167 SMARCA2P51531 1590 aa31.93■■■□□ 2.7
CHMP6-201ENST00000325167 CCDC88BA6NC98 1476 aa31.88■■■□□ 2.69
CHMP6-201ENST00000325167 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
CHMP6-201ENST00000325167 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
CHMP6-201ENST00000325167 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
CHMP6-201ENST00000325167 BAZ1BQ9UIG0 1483 aaKnown RBP31.73■■■□□ 2.67
CHMP6-201ENST00000325167 HMGXB3Q12766 1538 aa31.66■■■□□ 2.66
CHMP6-201ENST00000325167 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
CHMP6-201ENST00000325167 NESP48681 1621 aa31.35■■■□□ 2.61
CHMP6-201ENST00000325167 LOC105371045A0A1W2PR82 267 aa31.33■■■□□ 2.61
CHMP6-201ENST00000325167 ABCC8Q09428 1581 aa31.3■■■□□ 2.6
CHMP6-201ENST00000325167 WRNQ14191 1432 aaPredicted RBP eCLIP31.17■■■□□ 2.58
CHMP6-201ENST00000325167 FAM9AQ8IZU1 332 aaPredicted RBP31.13■■■□□ 2.57
CHMP6-201ENST00000325167 EEA1Q15075 1411 aa31.11■■■□□ 2.57
CHMP6-201ENST00000325167 CUX2O14529 1486 aa31.11■■■□□ 2.57
CHMP6-201ENST00000325167 LAMC3Q9Y6N6 1575 aa31.1■■■□□ 2.57
CHMP6-201ENST00000325167 CFTRP13569 1480 aa30.96■■■□□ 2.55
CHMP6-201ENST00000325167 KIF21AQ7Z4S6 1674 aa30.95■■■□□ 2.55
CHMP6-201ENST00000325167 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
CHMP6-201ENST00000325167 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
CHMP6-201ENST00000325167 THOC2Q8NI27 1593 aaKnown RBP30.92■■■□□ 2.54
CHMP6-201ENST00000325167 PDS5BQ9NTI5 1447 aa30.9■■■□□ 2.54
CHMP6-201ENST00000325167 TOP2BQ02880 1626 aa30.85■■■□□ 2.53
CHMP6-201ENST00000325167 SOGA1O94964 1423 aa30.84■■■□□ 2.53
CHMP6-201ENST00000325167 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
CHMP6-201ENST00000325167 BIVM-ERCC5R4GMW8 1640 aa30.8■■■□□ 2.52
CHMP6-201ENST00000325167 CSRNP3Q8WYN3 585 aa30.78■■■□□ 2.52
CHMP6-201ENST00000325167 DNAJC5Q9H3Z4 198 aa30.71■■■□□ 2.51
CHMP6-201ENST00000325167 RUSC2Q8N2Y8 1516 aa30.64■■■□□ 2.5
CHMP6-201ENST00000325167 MRC2Q9UBG0 1479 aa30.64■■■□□ 2.5
CHMP6-201ENST00000325167 TNIKQ9UKE5 1360 aa30.62■■■□□ 2.49
CHMP6-201ENST00000325167 GOLGA3Q08378 1498 aa30.62■■■□□ 2.49
CHMP6-201ENST00000325167 FANCD2Q9BXW9 1451 aa30.6■■■□□ 2.49
CHMP6-201ENST00000325167 CEP164Q9UPV0 1460 aa30.6■■■□□ 2.49
CHMP6-201ENST00000325167 CUX1P39880 1505 aa30.59■■■□□ 2.49
CHMP6-201ENST00000325167 EHMT2Q96KQ7 1210 aa30.58■■■□□ 2.49
CHMP6-201ENST00000325167 KIF21BO75037 1637 aa30.57■■■□□ 2.48
CHMP6-201ENST00000325167 WDR62O43379 1518 aa30.55■■■□□ 2.48
CHMP6-201ENST00000325167 TRIM26Q12899 539 aaPredicted RBP30.49■■■□□ 2.47
CHMP6-201ENST00000325167 PCGF6Q9BYE7 350 aa30.49■■■□□ 2.47
CHMP6-201ENST00000325167 CEP162Q5TB80 1403 aa30.43■■■□□ 2.46
CHMP6-201ENST00000325167 UBTFP17480 764 aaKnown RBP30.4■■■□□ 2.46
CHMP6-201ENST00000325167 KIF27Q86VH2 1401 aa30.38■■■□□ 2.45
CHMP6-201ENST00000325167 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
CHMP6-201ENST00000325167 ERICH3Q5RHP9 1530 aa30.31■■■□□ 2.44
CHMP6-201ENST00000325167 PRXQ9BXM0 1461 aa30.26■■■□□ 2.43
CHMP6-201ENST00000325167 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
CHMP6-201ENST00000325167 RAPGEF2Q9Y4G8 1499 aa30.22■■■□□ 2.43
CHMP6-201ENST00000325167 FGD5Q6ZNL6 1462 aa30.2■■■□□ 2.43
CHMP6-201ENST00000325167 CLIP1P30622 1438 aa30.11■■■□□ 2.41
CHMP6-201ENST00000325167 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
CHMP6-201ENST00000325167 HRCP23327 699 aa30.09■■■□□ 2.41
CHMP6-201ENST00000325167 ABCA10Q8WWZ4 1543 aa30.01■■■□□ 2.39
CHMP6-201ENST00000325167 IGF1RP08069 1367 aa29.99■■■□□ 2.39
CHMP6-201ENST00000325167 POLA1P09884 1462 aaPredicted RBP29.99■■■□□ 2.39
CHMP6-201ENST00000325167 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
CHMP6-201ENST00000325167 ZNF608Q9ULD9 1512 aaPredicted RBP29.94■■■□□ 2.38
CHMP6-201ENST00000325167 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
CHMP6-201ENST00000325167 CARMIL1Q5VZK9 1371 aa29.88■■■□□ 2.37
CHMP6-201ENST00000325167 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
CHMP6-201ENST00000325167 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
CHMP6-201ENST00000325167 CUL7Q14999 1698 aa29.78■■■□□ 2.36
CHMP6-201ENST00000325167 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
CHMP6-201ENST00000325167 TARBP1Q13395 1621 aaKnown RBP29.77■■■□□ 2.36
CHMP6-201ENST00000325167 OSCARQ8IYS5 282 aa29.76■■■□□ 2.36
CHMP6-201ENST00000325167 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
CHMP6-201ENST00000325167 APLP2Q06481 763 aa29.72■■■□□ 2.35
CHMP6-201ENST00000325167 AQRO60306 1485 aaKnown RBP eCLIP29.7■■■□□ 2.355e-10■■■■■ 50.7
CHMP6-201ENST00000325167 ARAP1Q96P48 1450 aa29.69■■■□□ 2.34
CHMP6-201ENST00000325167 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
CHMP6-201ENST00000325167 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
CHMP6-201ENST00000325167 GAPVD1Q14C86 1478 aa29.62■■■□□ 2.33
CHMP6-201ENST00000325167 RANGAP1P46060 587 aaPredicted RBP29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms