Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 OCIAD1-203ENST00000396448 1306 ntTSL 1 (best) BASIC9.56□□□□□ -0.888e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.898e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-228ENST00000514981 653 ntTSL 39.51□□□□□ -0.898e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-205ENST00000444354 1756 ntTSL 3 BASIC9.47□□□□□ -0.898e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-217ENST00000509164 563 ntTSL 49.33□□□□□ -0.928e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-201ENST00000264312 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.978e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-210ENST00000506801 571 ntTSL 2 BASIC7.77□□□□□ -1.178e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-212ENST00000507546 496 ntTSL 27.47□□□□□ -1.218e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-221ENST00000510824 582 ntTSL 37.47□□□□□ -1.218e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-225ENST00000512981 1209 ntTSL 47.42□□□□□ -1.228e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-224ENST00000512236 594 ntTSL 37.2□□□□□ -1.268e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-209ENST00000505922 555 ntTSL 56.21□□□□□ -1.428e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.13□□□□□ -1.598e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-218ENST00000509246 495 ntTSL 23.6□□□□□ -1.838e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-207ENST00000503016 720 ntTSL 33.58□□□□□ -1.848e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-208ENST00000504654 552 ntTSL 32.7□□□□□ -1.988e-8■■□□□ 11.9
EXOSC5Q9NQT4 OCIAD1-222ENST00000511102 688 ntTSL 22.47□□□□□ -2.018e-8■■□□□ 11.9
EXOSC5Q9NQT4 COL27A1-203ENST00000468565 1946 ntTSL 211.82□□□□□ -0.526e-16■■□□□ 11.9
EXOSC5Q9NQT4 ROCK2-201ENST00000261535 1795 ntTSL 519.18■□□□□ 0.663e-6■■□□□ 11.8
EXOSC5Q9NQT4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.493e-6■■□□□ 11.8
EXOSC5Q9NQT4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.53■□□□□ 0.083e-6■■□□□ 11.8
EXOSC5Q9NQT4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.243e-6■■□□□ 11.8
EXOSC5Q9NQT4 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.19□□□□□ -0.623e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-204ENST00000377499 3472 ntTSL 210.03□□□□□ -0.83e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-201ENST00000321797 5647 ntTSL 5 BASIC9.02□□□□□ -0.963e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-203ENST00000509814 3487 ntTSL 1 (best)8.89□□□□□ -0.993e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-206ENST00000513685 3501 ntTSL 1 (best)8.5□□□□□ -1.053e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-204ENST00000509960 3674 ntTSL 1 (best)8.47□□□□□ -1.053e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-218ENST00000526202 4121 ntTSL 2 BASIC8.38□□□□□ -1.073e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-205ENST00000510722 3530 ntTSL 1 (best)8.35□□□□□ -1.073e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-213ENST00000497947 995 ntTSL 57.99□□□□□ -1.133e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-202ENST00000503810 3782 ntTSL 57.97□□□□□ -1.133e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-206ENST00000447038 3165 ntTSL 27.79□□□□□ -1.163e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.39□□□□□ -1.233e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.273e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.33e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-205ENST00000377534 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.393e-6■■□□□ 11.8
EXOSC5Q9NQT4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.393e-6■■□□□ 11.8
EXOSC5Q9NQT4 ROCK2-204ENST00000431087 729 ntTSL 35.26□□□□□ -1.573e-6■■□□□ 11.8
EXOSC5Q9NQT4 ROCK2-206ENST00000462366 563 ntTSL 35.26□□□□□ -1.573e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-212ENST00000489941 597 ntTSL 24.65□□□□□ -1.673e-6■■□□□ 11.8
EXOSC5Q9NQT4 DENND4C-208ENST00000602708 551 ntTSL 42.11□□□□□ -2.073e-6■■□□□ 11.8
EXOSC5Q9NQT4 LMO7-216ENST00000525373 672 ntTSL 41.78□□□□□ -2.123e-6■■□□□ 11.8
EXOSC5Q9NQT4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.39■■□□□ 1.331e-7■■□□□ 11.7
EXOSC5Q9NQT4 PI4KAP2-209ENST00000479693 1906 ntTSL 1 (best)22.89■■□□□ 1.251e-7■■□□□ 11.7
EXOSC5Q9NQT4 PI4KAP2-207ENST00000476537 276 ntTSL 221.59■■□□□ 1.051e-7■■□□□ 11.7
EXOSC5Q9NQT4 PI4KAP2-212ENST00000491562 209 ntTSL 515.89■□□□□ 0.131e-7■■□□□ 11.7
EXOSC5Q9NQT4 PI4KAP2-205ENST00000467443 1869 ntTSL 214.84□□□□□ -0.031e-7■■□□□ 11.7
EXOSC5Q9NQT4 NEAT1-202ENST00000501122 22743 ntBASIC4.56□□□□□ -1.684e-34■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.79■■□□□ 1.41e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-216ENST00000550208 1040 ntTSL 318.17■□□□□ 0.51e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-215ENST00000549655 1962 ntTSL 216.53■□□□□ 0.241e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.2□□□□□ -0.141e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14□□□□□ -0.171e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.72□□□□□ -0.211e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.241e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.49□□□□□ -0.251e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.13□□□□□ -0.311e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-220ENST00000552127 778 ntTSL 412.92□□□□□ -0.341e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.55□□□□□ -0.41e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-207ENST00000546417 554 ntTSL 310.25□□□□□ -0.771e-10■■□□□ 11.6
EXOSC5Q9NQT4 BRF1-204ENST00000392557 3579 ntTSL 1 (best) BASIC9.54□□□□□ -0.881e-10■■□□□ 11.6
EXOSC5Q9NQT4 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC9.39□□□□□ -0.913e-9■■□□□ 11.6
EXOSC5Q9NQT4 AC005394.1-201ENST00000589999 1269 ntTSL 1 (best) BASIC8.44□□□□□ -1.063e-9■■□□□ 11.6
EXOSC5Q9NQT4 U3.19-201ENST00000390893 196 ntBASIC2.97□□□□□ -1.931e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-220ENST00000588901 589 ntTSL 214.12□□□□□ -0.153e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.69□□□□□ -0.223e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.79□□□□□ -0.363e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.06□□□□□ -0.483e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-205ENST00000544137 3047 ntTSL 1 (best) BASIC10.04□□□□□ -0.83e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-201ENST00000264649 4110 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.073e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC7.99□□□□□ -1.133e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-212ENST00000587375 546 ntTSL 46.55□□□□□ -1.363e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-222ENST00000589727 664 ntTSL 56.45□□□□□ -1.383e-9■■□□□ 11.6
EXOSC5Q9NQT4 ATP6V0A1-224ENST00000592324 585 ntTSL 45.61□□□□□ -1.513e-9■■□□□ 11.6
EXOSC5Q9NQT4 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.19□□□□□ -1.12e-8■■□□□ 11.5
EXOSC5Q9NQT4 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.362e-8■■□□□ 11.5
EXOSC5Q9NQT4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.7■□□□□ 0.261e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.95■□□□□ 0.141e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.121e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-204ENST00000375646 2176 ntTSL 5 BASIC10.7□□□□□ -0.71e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.85□□□□□ -1.631e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-210ENST00000439676 2762 ntTSL 54.39□□□□□ -1.711e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-201ENST00000345541 4526 ntTSL 1 (best)3.94□□□□□ -1.781e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.93□□□□□ -1.781e-6■■□□□ 11.5
EXOSC5Q9NQT4 WAC-208ENST00000424454 1330 ntTSL 23.9□□□□□ -1.791e-6■■□□□ 11.5
EXOSC5Q9NQT4 CORO1C-216ENST00000551059 474 ntTSL 214.93□□□□□ -0.024e-7■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.278e-10■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.238e-10■■□□□ 11.5
EXOSC5Q9NQT4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.048e-10■■□□□ 11.5
EXOSC5Q9NQT4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.71□□□□□ -0.058e-10■■□□□ 11.5
EXOSC5Q9NQT4 COQ8A-209ENST00000489044 941 ntTSL 314.61□□□□□ -0.078e-10■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-204ENST00000585886 2362 ntTSL 1 (best)13.88□□□□□ -0.198e-10■■□□□ 11.5
EXOSC5Q9NQT4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.328e-10■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.328e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-218ENST00000531416 1969 ntTSL 213.03□□□□□ -0.328e-10■■□□□ 11.5
EXOSC5Q9NQT4 COQ8A-205ENST00000478406 3612 ntTSL 212.76□□□□□ -0.378e-10■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.478e-10■■□□□ 11.5
EXOSC5Q9NQT4 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.768e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-225ENST00000532383 6769 ntTSL 1 (best)8.8□□□□□ -18e-10■■□□□ 11.5
Retrieved 100 of 8,799 protein–RNA pairs in 117.7 ms