RNA–Protein interactions for RNA: ENST00000357063.7

LMO7-203, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LMO7, Length 8,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-203ENST00000357063 PELP1Q8IZL8 1130 aaKnown RBP12.4□□□□□ -0.42
LMO7-203ENST00000357063 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
LMO7-203ENST00000357063 MYT1Q01538 1121 aa12.07□□□□□ -0.48
LMO7-203ENST00000357063 SUPT5HO00267 1087 aaKnown RBP11.93□□□□□ -0.5
LMO7-203ENST00000357063 ERICH6Q7L0X2 663 aa11.91□□□□□ -0.5
LMO7-203ENST00000357063 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
LMO7-203ENST00000357063 CENPBP07199 599 aaPredicted RBP11.8□□□□□ -0.52
LMO7-203ENST00000357063 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
LMO7-203ENST00000357063 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
LMO7-203ENST00000357063 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
LMO7-203ENST00000357063 ZEB1P37275 1124 aaPredicted RBP11.6□□□□□ -0.55
LMO7-203ENST00000357063 APLP2Q06481 763 aa11.56□□□□□ -0.56
LMO7-203ENST00000357063 NEFLP07196 543 aa11.48□□□□□ -0.57
LMO7-203ENST00000357063 NISCHQ9Y2I1 1504 aa11.43□□□□□ -0.58
LMO7-203ENST00000357063 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
LMO7-203ENST00000357063 TTBK1Q5TCY1 1321 aaPredicted RBP11.42□□□□□ -0.58
LMO7-203ENST00000357063 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
LMO7-203ENST00000357063 DAXXQ9UER7 740 aaPredicted RBP11.26□□□□□ -0.61
LMO7-203ENST00000357063 HRCP23327 699 aa11.14□□□□□ -0.63
LMO7-203ENST00000357063 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
LMO7-203ENST00000357063 TRIM26Q12899 539 aaPredicted RBP11.09□□□□□ -0.63
LMO7-203ENST00000357063 RANGAP1P46060 587 aaPredicted RBP11.07□□□□□ -0.64
LMO7-203ENST00000357063 TRIM41Q8WV44 630 aa11.04□□□□□ -0.64
LMO7-203ENST00000357063 ATP1B4Q9UN42 357 aaPredicted RBP11.01□□□□□ -0.65
LMO7-203ENST00000357063 ZNF316A6NFI3 1004 aaPredicted RBP11□□□□□ -0.65
LMO7-203ENST00000357063 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
LMO7-203ENST00000357063 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
LMO7-203ENST00000357063 DIEXFQ68CQ4 756 aaKnown RBP10.92□□□□□ -0.66
LMO7-203ENST00000357063 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
LMO7-203ENST00000357063 CLSPNQ9HAW4 1339 aa10.82□□□□□ -0.68
LMO7-203ENST00000357063 POLR3GLQ9BT43 218 aa10.81□□□□□ -0.68
LMO7-203ENST00000357063 CDK11AQ9UQ88 783 aaPredicted RBP10.78□□□□□ -0.68
LMO7-203ENST00000357063 EIF5BO60841 1220 aaKnown RBP10.74□□□□□ -0.69
LMO7-203ENST00000357063 CNGB1Q14028 1251 aaPredicted RBP10.73□□□□□ -0.69
LMO7-203ENST00000357063 GLIPR1L2Q4G1C9 344 aa10.73□□□□□ -0.69
LMO7-203ENST00000357063 BCANQ96GW7 911 aa10.72□□□□□ -0.69
LMO7-203ENST00000357063 ITGAEP38570 1179 aa10.71□□□□□ -0.69
LMO7-203ENST00000357063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.7□□□□□ -0.7
LMO7-203ENST00000357063 LOC105371045A0A1W2PR82 267 aa10.67□□□□□ -0.7
LMO7-203ENST00000357063 HNRNPUL2Q1KMD3 747 aaKnown RBP10.67□□□□□ -0.7
LMO7-203ENST00000357063 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
LMO7-203ENST00000357063 ACIN1Q9UKV3 1341 aaKnown RBP10.62□□□□□ -0.71
LMO7-203ENST00000357063 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
LMO7-203ENST00000357063 MYT1LQ9UL68 1186 aa10.56□□□□□ -0.72
LMO7-203ENST00000357063 ANP32CO43423 234 aa10.56□□□□□ -0.72
LMO7-203ENST00000357063 ANP32BQ92688 251 aaKnown RBP10.54□□□□□ -0.72
LMO7-203ENST00000357063 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
LMO7-203ENST00000357063 NPM2Q86SE8 214 aaKnown RBP10.49□□□□□ -0.73
LMO7-203ENST00000357063 NBR1Q14596 966 aa10.47□□□□□ -0.73
LMO7-203ENST00000357063 CHIC1Q5VXU3 224 aa10.47□□□□□ -0.73
LMO7-203ENST00000357063 NEUROD1Q13562 356 aa10.45□□□□□ -0.74
LMO7-203ENST00000357063 CANXP27824 592 aaKnown RBP10.42□□□□□ -0.74
LMO7-203ENST00000357063 FKBP8Q14318 412 aa10.41□□□□□ -0.74
LMO7-203ENST00000357063 FAM50AQ14320 339 aaKnown RBP10.4□□□□□ -0.75
LMO7-203ENST00000357063 HSP90AA1P07900 732 aaKnown RBP10.39□□□□□ -0.75
LMO7-203ENST00000357063 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
LMO7-203ENST00000357063 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
LMO7-203ENST00000357063 UPF2Q9HAU5 1272 aaKnown RBP10.34□□□□□ -0.75
LMO7-203ENST00000357063 ARXQ96QS3 562 aa10.32□□□□□ -0.76
LMO7-203ENST00000357063 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
LMO7-203ENST00000357063 TNNT2P45379 298 aaPredicted RBP10.29□□□□□ -0.76
LMO7-203ENST00000357063 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
LMO7-203ENST00000357063 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
LMO7-203ENST00000357063 ANP32EQ9BTT0 268 aa10.25□□□□□ -0.77
LMO7-203ENST00000357063 TRIM44Q96DX7 344 aaPredicted RBP10.23□□□□□ -0.77
LMO7-203ENST00000357063 HNRNPUQ00839 825 aaKnown RBP eCLIP10.22□□□□□ -0.77
LMO7-203ENST00000357063 CCDC180Q9P1Z9 1646 aa10.22□□□□□ -0.77
LMO7-203ENST00000357063 CCDC136Q96JN2 1154 aa10.22□□□□□ -0.77
LMO7-203ENST00000357063 NEFMP07197 916 aa10.21□□□□□ -0.77
LMO7-203ENST00000357063 DCAF1Q9Y4B6 1507 aa10.19□□□□□ -0.78
LMO7-203ENST00000357063 DDRGK1Q96HY6 314 aa10.15□□□□□ -0.78
LMO7-203ENST00000357063 FAM9BQ8IZU0 186 aa10.14□□□□□ -0.79
LMO7-203ENST00000357063 RTN4Q9NQC3 1192 aaKnown RBP10.14□□□□□ -0.79
LMO7-203ENST00000357063 NAP1L5Q96NT1 182 aaPredicted RBP10.13□□□□□ -0.79
LMO7-203ENST00000357063 ERICH6BQ5W0A0 696 aa10.12□□□□□ -0.79
LMO7-203ENST00000357063 CDK11BP21127 795 aaKnown RBP10.12□□□□□ -0.79
LMO7-203ENST00000357063 BECN1Q14457 450 aa10.12□□□□□ -0.79
LMO7-203ENST00000357063 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.11□□□□□ -0.79
LMO7-203ENST00000357063 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
LMO7-203ENST00000357063 IRX6P78412 446 aaPredicted RBP10.09□□□□□ -0.79
LMO7-203ENST00000357063 DNTTIP2Q5QJE6 756 aaKnown RBP10.09□□□□□ -0.79
LMO7-203ENST00000357063 TONSLQ96HA7 1378 aa10.08□□□□□ -0.8
LMO7-203ENST00000357063 SALL2Q9Y467 1007 aaPredicted RBP10.08□□□□□ -0.8
LMO7-203ENST00000357063 MIER1Q8N108 512 aa10.06□□□□□ -0.8
LMO7-203ENST00000357063 TMC1Q8TDI8 760 aa10.06□□□□□ -0.8
LMO7-203ENST00000357063 GOLGA6L22H0YM25 854 aa10.04□□□□□ -0.8
LMO7-203ENST00000357063 PTMAP06454 111 aaKnown RBP10.03□□□□□ -0.8
LMO7-203ENST00000357063 NCLP19338 710 aaKnown RBP10.02□□□□□ -0.81
LMO7-203ENST00000357063 NOP58Q9Y2X3 529 aaKnown RBP10.01□□□□□ -0.81
LMO7-203ENST00000357063 PPM1GO15355 546 aaPredicted RBP10□□□□□ -0.81
LMO7-203ENST00000357063 DEKP35659 375 aaKnown RBP9.98□□□□□ -0.81
LMO7-203ENST00000357063 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
LMO7-203ENST00000357063 MRS2Q9HD23 443 aa9.97□□□□□ -0.81
LMO7-203ENST00000357063 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
LMO7-203ENST00000357063 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.81
LMO7-203ENST00000357063 LAS1LQ9Y4W2 734 aaKnown RBP9.96□□□□□ -0.81
LMO7-203ENST00000357063 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
LMO7-203ENST00000357063 SUPT16HQ9Y5B9 1047 aaKnown RBP9.93□□□□□ -0.82
LMO7-203ENST00000357063 MSNP26038 577 aaKnown RBP9.92□□□□□ -0.82
LMO7-203ENST00000357063 ZRSR1Q15695 479 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms