RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 NISCHQ9Y2I1 1504 aa30.86■■■□□ 2.53
BRF1-207ENST00000546417 ABCC9O60706 1549 aa28.51■■■□□ 2.15
BRF1-207ENST00000546417 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
BRF1-207ENST00000546417 DNAJC5BQ9UF47 199 aa27.25■■□□□ 1.95
BRF1-207ENST00000546417 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
BRF1-207ENST00000546417 NACADO15069 1562 aa26.58■■□□□ 1.85
BRF1-207ENST00000546417 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
BRF1-207ENST00000546417 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
BRF1-207ENST00000546417 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
BRF1-207ENST00000546417 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
BRF1-207ENST00000546417 MYO15BQ96JP2 1530 aa26.04■■□□□ 1.76
BRF1-207ENST00000546417 CECR2Q9BXF3 1484 aa25.76■■□□□ 1.71
BRF1-207ENST00000546417 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
BRF1-207ENST00000546417 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
BRF1-207ENST00000546417 EIF4G1Q04637 1599 aaKnown RBP25.53■■□□□ 1.68
BRF1-207ENST00000546417 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
BRF1-207ENST00000546417 DCAF1Q9Y4B6 1507 aa25.47■■□□□ 1.67
BRF1-207ENST00000546417 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
BRF1-207ENST00000546417 SCRIBQ14160 1630 aa25.41■■□□□ 1.66
BRF1-207ENST00000546417 CUX2O14529 1486 aa24.85■■□□□ 1.57
BRF1-207ENST00000546417 ERCC6Q03468 1493 aa24.69■■□□□ 1.54
BRF1-207ENST00000546417 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
BRF1-207ENST00000546417 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
BRF1-207ENST00000546417 NESP48681 1621 aa24.31■■□□□ 1.48
BRF1-207ENST00000546417 HMGXB3Q12766 1538 aa24.3■■□□□ 1.48
BRF1-207ENST00000546417 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
BRF1-207ENST00000546417 SMARCA4P51532 1647 aa24.2■■□□□ 1.46
BRF1-207ENST00000546417 THOC2Q8NI27 1593 aaKnown RBP24.19■■□□□ 1.46
BRF1-207ENST00000546417 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
BRF1-207ENST00000546417 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
BRF1-207ENST00000546417 LAMC3Q9Y6N6 1575 aa24.1■■□□□ 1.45
BRF1-207ENST00000546417 BAZ1AQ9NRL2 1556 aaPredicted RBP24.01■■□□□ 1.43
BRF1-207ENST00000546417 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
BRF1-207ENST00000546417 PDS5BQ9NTI5 1447 aa23.99■■□□□ 1.43
BRF1-207ENST00000546417 PEG3Q9GZU2 1588 aa23.97■■□□□ 1.43
BRF1-207ENST00000546417 MRC2Q9UBG0 1479 aa23.79■■□□□ 1.4
BRF1-207ENST00000546417 CADPSQ9ULU8 1353 aa23.78■■□□□ 1.4
BRF1-207ENST00000546417 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
BRF1-207ENST00000546417 WDR62O43379 1518 aa23.74■■□□□ 1.39
BRF1-207ENST00000546417 OSCARQ8IYS5 282 aa23.65■■□□□ 1.38
BRF1-207ENST00000546417 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.37
BRF1-207ENST00000546417 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
BRF1-207ENST00000546417 WIZO95785 1651 aa23.44■■□□□ 1.34
BRF1-207ENST00000546417 CFTRP13569 1480 aa23.36■■□□□ 1.33
BRF1-207ENST00000546417 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
BRF1-207ENST00000546417 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
BRF1-207ENST00000546417 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
BRF1-207ENST00000546417 URB2Q14146 1524 aaKnown RBP23.32■■□□□ 1.32
BRF1-207ENST00000546417 ARHGEF11O15085 1522 aa23.22■■□□□ 1.31
BRF1-207ENST00000546417 IFT140Q96RY7 1462 aa23.13■■□□□ 1.29
BRF1-207ENST00000546417 ZNF608Q9ULD9 1512 aaPredicted RBP23.12■■□□□ 1.29
BRF1-207ENST00000546417 CYB5RLQ6IPT4 315 aa23.11■■□□□ 1.29
BRF1-207ENST00000546417 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
BRF1-207ENST00000546417 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
BRF1-207ENST00000546417 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
BRF1-207ENST00000546417 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
BRF1-207ENST00000546417 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
BRF1-207ENST00000546417 EIF4G3O43432 1585 aaKnown RBP22.97■■□□□ 1.27
BRF1-207ENST00000546417 ABCC8Q09428 1581 aa22.94■■□□□ 1.26
BRF1-207ENST00000546417 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
BRF1-207ENST00000546417 CHD1O14646 1710 aa22.93■■□□□ 1.26
BRF1-207ENST00000546417 FBLN2P98095 1184 aa22.86■■□□□ 1.25
BRF1-207ENST00000546417 CCDC88BA6NC98 1476 aa22.85■■□□□ 1.25
BRF1-207ENST00000546417 AQRO60306 1485 aaKnown RBP eCLIP22.85■■□□□ 1.253e-6■■■■■ 31
BRF1-207ENST00000546417 AEBP2Q6ZN18 517 aaPredicted RBP22.85■■□□□ 1.25
BRF1-207ENST00000546417 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
BRF1-207ENST00000546417 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
BRF1-207ENST00000546417 POLA1P09884 1462 aaPredicted RBP22.7■■□□□ 1.22
BRF1-207ENST00000546417 CLASP1Q7Z460 1538 aa22.64■■□□□ 1.21
BRF1-207ENST00000546417 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
BRF1-207ENST00000546417 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
BRF1-207ENST00000546417 SYNJ1O43426 1573 aa22.61■■□□□ 1.21
BRF1-207ENST00000546417 SOGA1O94964 1423 aa22.61■■□□□ 1.21
BRF1-207ENST00000546417 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
BRF1-207ENST00000546417 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
BRF1-207ENST00000546417 WDR97A6NE52 1622 aa22.58■■□□□ 1.21
BRF1-207ENST00000546417 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
BRF1-207ENST00000546417 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
BRF1-207ENST00000546417 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
BRF1-207ENST00000546417 FGD5Q6ZNL6 1462 aa22.47■■□□□ 1.19
BRF1-207ENST00000546417 GAPVD1Q14C86 1478 aa22.46■■□□□ 1.19
BRF1-207ENST00000546417 CUX1P39880 1505 aa22.35■■□□□ 1.17
BRF1-207ENST00000546417 PBRM1Q86U86 1689 aa22.34■■□□□ 1.17
BRF1-207ENST00000546417 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
BRF1-207ENST00000546417 ABCA5Q8WWZ7 1642 aa22.2■■□□□ 1.15
BRF1-207ENST00000546417 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
BRF1-207ENST00000546417 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
BRF1-207ENST00000546417 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
BRF1-207ENST00000546417 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
BRF1-207ENST00000546417 NUP160Q12769 1436 aa22.13■■□□□ 1.13
BRF1-207ENST00000546417 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
BRF1-207ENST00000546417 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
BRF1-207ENST00000546417 FHAD1B1AJZ9 1412 aa22.02■■□□□ 1.12
BRF1-207ENST00000546417 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.11
BRF1-207ENST00000546417 FAM69CQ0P6D2 419 aa21.98■■□□□ 1.11
BRF1-207ENST00000546417 PRG4Q92954 1404 aaPredicted RBP21.97■■□□□ 1.11
BRF1-207ENST00000546417 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
BRF1-207ENST00000546417 NPM1P06748 294 aaKnown RBP eCLIP21.94■■□□□ 1.1
BRF1-207ENST00000546417 JPH4Q96JJ6 628 aa21.93■■□□□ 1.1
BRF1-207ENST00000546417 ERICH3Q5RHP9 1530 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms