RNA–Protein interactions for RNA: ENST00000343619.8

ATP6V0A1-202, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP6V0A1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-202ENST00000343619 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
ATP6V0A1-202ENST00000343619 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
ATP6V0A1-202ENST00000343619 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
ATP6V0A1-202ENST00000343619 ZCCHC6Q5VYS8 1495 aaKnown RBP17.62■□□□□ 0.41
ATP6V0A1-202ENST00000343619 ABCC9O60706 1549 aa17.6■□□□□ 0.41
ATP6V0A1-202ENST00000343619 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
ATP6V0A1-202ENST00000343619 DCAF1Q9Y4B6 1507 aa17.22■□□□□ 0.35
ATP6V0A1-202ENST00000343619 NACADO15069 1562 aa17.04■□□□□ 0.32
ATP6V0A1-202ENST00000343619 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
ATP6V0A1-202ENST00000343619 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
ATP6V0A1-202ENST00000343619 RB1CC1Q8TDY2 1594 aa16.96■□□□□ 0.31
ATP6V0A1-202ENST00000343619 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
ATP6V0A1-202ENST00000343619 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.275e-7■□□□□ 10.9
ATP6V0A1-202ENST00000343619 UNC13AQ9UPW8 1703 aa16.49■□□□□ 0.23
ATP6V0A1-202ENST00000343619 CECR2Q9BXF3 1484 aa16.46■□□□□ 0.22
ATP6V0A1-202ENST00000343619 BICRAQ9NZM4 1560 aa16.38■□□□□ 0.21
ATP6V0A1-202ENST00000343619 RSF1Q96T23 1441 aaPredicted RBP16.38■□□□□ 0.21
ATP6V0A1-202ENST00000343619 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
ATP6V0A1-202ENST00000343619 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
ATP6V0A1-202ENST00000343619 WIZO95785 1651 aa16.16■□□□□ 0.18
ATP6V0A1-202ENST00000343619 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
ATP6V0A1-202ENST00000343619 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
ATP6V0A1-202ENST00000343619 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
ATP6V0A1-202ENST00000343619 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.14
ATP6V0A1-202ENST00000343619 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
ATP6V0A1-202ENST00000343619 TOP2AP11388 1531 aaKnown RBP15.93■□□□□ 0.14
ATP6V0A1-202ENST00000343619 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
ATP6V0A1-202ENST00000343619 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
ATP6V0A1-202ENST00000343619 PEG3Q9GZU2 1588 aa15.82■□□□□ 0.12
ATP6V0A1-202ENST00000343619 TRIM41Q8WV44 630 aa15.82■□□□□ 0.12
ATP6V0A1-202ENST00000343619 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
ATP6V0A1-202ENST00000343619 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
ATP6V0A1-202ENST00000343619 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
ATP6V0A1-202ENST00000343619 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
ATP6V0A1-202ENST00000343619 HMGXB3Q12766 1538 aa15.68■□□□□ 0.1
ATP6V0A1-202ENST00000343619 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
ATP6V0A1-202ENST00000343619 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
ATP6V0A1-202ENST00000343619 LOC105371045A0A1W2PR82 267 aa15.51■□□□□ 0.07
ATP6V0A1-202ENST00000343619 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
ATP6V0A1-202ENST00000343619 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
ATP6V0A1-202ENST00000343619 CFTRP13569 1480 aa15.43■□□□□ 0.06
ATP6V0A1-202ENST00000343619 NESP48681 1621 aa15.39■□□□□ 0.05
ATP6V0A1-202ENST00000343619 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
ATP6V0A1-202ENST00000343619 SOGA1O94964 1423 aa15.31■□□□□ 0.04
ATP6V0A1-202ENST00000343619 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
ATP6V0A1-202ENST00000343619 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
ATP6V0A1-202ENST00000343619 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
ATP6V0A1-202ENST00000343619 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
ATP6V0A1-202ENST00000343619 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
ATP6V0A1-202ENST00000343619 CUX1P39880 1505 aa15.23■□□□□ 0.03
ATP6V0A1-202ENST00000343619 UBTFP17480 764 aaKnown RBP15.23■□□□□ 0.03
ATP6V0A1-202ENST00000343619 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
ATP6V0A1-202ENST00000343619 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
ATP6V0A1-202ENST00000343619 TOP2BQ02880 1626 aa15.2■□□□□ 0.02
ATP6V0A1-202ENST00000343619 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
ATP6V0A1-202ENST00000343619 EEA1Q15075 1411 aa15.15■□□□□ 0.02
ATP6V0A1-202ENST00000343619 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
ATP6V0A1-202ENST00000343619 BIVM-ERCC5R4GMW8 1640 aa15.12■□□□□ 0.01
ATP6V0A1-202ENST00000343619 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
ATP6V0A1-202ENST00000343619 CUX2O14529 1486 aa15.1■□□□□ 0.01
ATP6V0A1-202ENST00000343619 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
ATP6V0A1-202ENST00000343619 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
ATP6V0A1-202ENST00000343619 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
ATP6V0A1-202ENST00000343619 URB2Q14146 1524 aaKnown RBP15.06■□□□□ 0
ATP6V0A1-202ENST00000343619 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
ATP6V0A1-202ENST00000343619 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
ATP6V0A1-202ENST00000343619 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
ATP6V0A1-202ENST00000343619 POLA1P09884 1462 aaPredicted RBP15.03■□□□□ -0
ATP6V0A1-202ENST00000343619 GOLGA3Q08378 1498 aa15.01□□□□□ -0.01
ATP6V0A1-202ENST00000343619 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
ATP6V0A1-202ENST00000343619 MRC2Q9UBG0 1479 aa14.99□□□□□ -0.01
ATP6V0A1-202ENST00000343619 RAPGEF2Q9Y4G8 1499 aa14.97□□□□□ -0.01
ATP6V0A1-202ENST00000343619 TNIKQ9UKE5 1360 aa14.95□□□□□ -0.02
ATP6V0A1-202ENST00000343619 IGF1RP08069 1367 aa14.94□□□□□ -0.02
ATP6V0A1-202ENST00000343619 PPARGC1BQ86YN6 1023 aaKnown RBP14.93□□□□□ -0.02
ATP6V0A1-202ENST00000343619 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
ATP6V0A1-202ENST00000343619 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
ATP6V0A1-202ENST00000343619 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
ATP6V0A1-202ENST00000343619 KIF21BO75037 1637 aa14.88□□□□□ -0.03
ATP6V0A1-202ENST00000343619 PRXQ9BXM0 1461 aa14.87□□□□□ -0.03
ATP6V0A1-202ENST00000343619 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
ATP6V0A1-202ENST00000343619 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.031e-7■■■■■ 40.8
ATP6V0A1-202ENST00000343619 CLIP1P30622 1438 aa14.85□□□□□ -0.03
ATP6V0A1-202ENST00000343619 PCGF6Q9BYE7 350 aa14.83□□□□□ -0.03
ATP6V0A1-202ENST00000343619 WDR62O43379 1518 aa14.81□□□□□ -0.04
ATP6V0A1-202ENST00000343619 FBLN2P98095 1184 aa14.81□□□□□ -0.04
ATP6V0A1-202ENST00000343619 ATP1B4Q9UN42 357 aaPredicted RBP14.81□□□□□ -0.04
ATP6V0A1-202ENST00000343619 ERICH3Q5RHP9 1530 aa14.79□□□□□ -0.04
ATP6V0A1-202ENST00000343619 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
ATP6V0A1-202ENST00000343619 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
ATP6V0A1-202ENST00000343619 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
ATP6V0A1-202ENST00000343619 APLP2Q06481 763 aa14.78□□□□□ -0.04
ATP6V0A1-202ENST00000343619 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
ATP6V0A1-202ENST00000343619 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
ATP6V0A1-202ENST00000343619 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
ATP6V0A1-202ENST00000343619 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
ATP6V0A1-202ENST00000343619 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
ATP6V0A1-202ENST00000343619 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
ATP6V0A1-202ENST00000343619 TRIM26Q12899 539 aaPredicted RBP14.69□□□□□ -0.06
ATP6V0A1-202ENST00000343619 CUL7Q14999 1698 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms