RNA–Protein interactions for RNA: ENST00000377534.7

LMO7-205, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMO7, Length 4,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-205ENST00000377534 NISCHQ9Y2I1 1504 aa15.7■□□□□ 0.1
LMO7-205ENST00000377534 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
LMO7-205ENST00000377534 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
LMO7-205ENST00000377534 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
LMO7-205ENST00000377534 ZCCHC6Q5VYS8 1495 aaKnown RBP13.2□□□□□ -0.3
LMO7-205ENST00000377534 ABCC9O60706 1549 aa13.1□□□□□ -0.31
LMO7-205ENST00000377534 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
LMO7-205ENST00000377534 DCAF1Q9Y4B6 1507 aa12.87□□□□□ -0.35
LMO7-205ENST00000377534 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
LMO7-205ENST00000377534 MYO15BQ96JP2 1530 aa12.61□□□□□ -0.39
LMO7-205ENST00000377534 NACADO15069 1562 aa12.58□□□□□ -0.4
LMO7-205ENST00000377534 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
LMO7-205ENST00000377534 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
LMO7-205ENST00000377534 RB1CC1Q8TDY2 1594 aa12.47□□□□□ -0.41
LMO7-205ENST00000377534 CHIC1Q5VXU3 224 aa12.36□□□□□ -0.43
LMO7-205ENST00000377534 RSF1Q96T23 1441 aaPredicted RBP12.31□□□□□ -0.44
LMO7-205ENST00000377534 CECR2Q9BXF3 1484 aa12.22□□□□□ -0.45
LMO7-205ENST00000377534 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
LMO7-205ENST00000377534 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
LMO7-205ENST00000377534 BAZ1AQ9NRL2 1556 aaPredicted RBP12.13□□□□□ -0.47
LMO7-205ENST00000377534 WIZO95785 1651 aa12.07□□□□□ -0.48
LMO7-205ENST00000377534 UNC13AQ9UPW8 1703 aa12.05□□□□□ -0.48
LMO7-205ENST00000377534 SMARCA4P51532 1647 aa12.01□□□□□ -0.49
LMO7-205ENST00000377534 LOC105371045A0A1W2PR82 267 aa11.98□□□□□ -0.49
LMO7-205ENST00000377534 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
LMO7-205ENST00000377534 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
LMO7-205ENST00000377534 EHMT2Q96KQ7 1210 aa11.93□□□□□ -0.5
LMO7-205ENST00000377534 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
LMO7-205ENST00000377534 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
LMO7-205ENST00000377534 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
LMO7-205ENST00000377534 SMARCA2P51531 1590 aa11.81□□□□□ -0.52
LMO7-205ENST00000377534 FBLN2P98095 1184 aa11.8□□□□□ -0.52
LMO7-205ENST00000377534 APLP2Q06481 763 aa11.8□□□□□ -0.52
LMO7-205ENST00000377534 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
LMO7-205ENST00000377534 PCGF6Q9BYE7 350 aa11.78□□□□□ -0.52
LMO7-205ENST00000377534 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
LMO7-205ENST00000377534 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
LMO7-205ENST00000377534 MYT1Q01538 1121 aa11.7□□□□□ -0.54
LMO7-205ENST00000377534 EIF4G1Q04637 1599 aaKnown RBP11.68□□□□□ -0.54
LMO7-205ENST00000377534 ATP1B4Q9UN42 357 aaPredicted RBP11.67□□□□□ -0.54
LMO7-205ENST00000377534 WRNQ14191 1432 aaPredicted RBP eCLIP11.66□□□□□ -0.54
LMO7-205ENST00000377534 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.55
LMO7-205ENST00000377534 TTBK1Q5TCY1 1321 aaPredicted RBP11.64□□□□□ -0.55
LMO7-205ENST00000377534 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
LMO7-205ENST00000377534 TRIM26Q12899 539 aaPredicted RBP11.64□□□□□ -0.55
LMO7-205ENST00000377534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.64□□□□□ -0.55
LMO7-205ENST00000377534 HNRNPUL2Q1KMD3 747 aaKnown RBP11.64□□□□□ -0.55
LMO7-205ENST00000377534 PELP1Q8IZL8 1130 aaKnown RBP11.64□□□□□ -0.55
LMO7-205ENST00000377534 NCAPD3P42695 1498 aa11.62□□□□□ -0.55
LMO7-205ENST00000377534 CSRNP3Q8WYN3 585 aa11.61□□□□□ -0.55
LMO7-205ENST00000377534 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
LMO7-205ENST00000377534 EEA1Q15075 1411 aa11.59□□□□□ -0.55
LMO7-205ENST00000377534 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
LMO7-205ENST00000377534 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
LMO7-205ENST00000377534 SOGA1O94964 1423 aa11.58□□□□□ -0.56
LMO7-205ENST00000377534 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
LMO7-205ENST00000377534 CHMP7Q8WUX9 453 aaPredicted RBP11.53□□□□□ -0.56
LMO7-205ENST00000377534 HRCP23327 699 aa11.53□□□□□ -0.56
LMO7-205ENST00000377534 PPARGC1BQ86YN6 1023 aaKnown RBP11.52□□□□□ -0.56
LMO7-205ENST00000377534 SYNJ1O43426 1573 aa11.49□□□□□ -0.57
LMO7-205ENST00000377534 GOLGA3Q08378 1498 aa11.48□□□□□ -0.57
LMO7-205ENST00000377534 RUSC2Q8N2Y8 1516 aa11.48□□□□□ -0.57
LMO7-205ENST00000377534 SLC24A1O60721 1099 aa11.48□□□□□ -0.57
LMO7-205ENST00000377534 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
LMO7-205ENST00000377534 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
LMO7-205ENST00000377534 CEP162Q5TB80 1403 aa11.46□□□□□ -0.58
LMO7-205ENST00000377534 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
LMO7-205ENST00000377534 CFTRP13569 1480 aa11.44□□□□□ -0.58
LMO7-205ENST00000377534 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
LMO7-205ENST00000377534 TOP2BQ02880 1626 aa11.41□□□□□ -0.58
LMO7-205ENST00000377534 TRHP20396 242 aaPredicted RBP11.4□□□□□ -0.58
LMO7-205ENST00000377534 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
LMO7-205ENST00000377534 DNAJC5BQ9UF47 199 aa11.36□□□□□ -0.59
LMO7-205ENST00000377534 ZEB1P37275 1124 aaPredicted RBP11.36□□□□□ -0.59
LMO7-205ENST00000377534 CUX1P39880 1505 aa11.35□□□□□ -0.59
LMO7-205ENST00000377534 CLIP1P30622 1438 aa11.35□□□□□ -0.59
LMO7-205ENST00000377534 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
LMO7-205ENST00000377534 KIF21BO75037 1637 aa11.34□□□□□ -0.59
LMO7-205ENST00000377534 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
LMO7-205ENST00000377534 FANCD2Q9BXW9 1451 aa11.31□□□□□ -0.6
LMO7-205ENST00000377534 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
LMO7-205ENST00000377534 CUX2O14529 1486 aa11.29□□□□□ -0.6
LMO7-205ENST00000377534 ESF1Q9H501 851 aaKnown RBP11.29□□□□□ -0.6
LMO7-205ENST00000377534 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
LMO7-205ENST00000377534 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
LMO7-205ENST00000377534 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
LMO7-205ENST00000377534 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
LMO7-205ENST00000377534 NESP48681 1621 aa11.24□□□□□ -0.61
LMO7-205ENST00000377534 ERICH3Q5RHP9 1530 aa11.23□□□□□ -0.61
LMO7-205ENST00000377534 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
LMO7-205ENST00000377534 PRXQ9BXM0 1461 aa11.22□□□□□ -0.61
LMO7-205ENST00000377534 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.62
LMO7-205ENST00000377534 ERICH6Q7L0X2 663 aa11.2□□□□□ -0.62
LMO7-205ENST00000377534 LAMC3Q9Y6N6 1575 aa11.19□□□□□ -0.62
LMO7-205ENST00000377534 IGF1RP08069 1367 aa11.18□□□□□ -0.62
LMO7-205ENST00000377534 DNMBPQ6XZF7 1577 aa11.18□□□□□ -0.62
LMO7-205ENST00000377534 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
LMO7-205ENST00000377534 AEBP2Q6ZN18 517 aaPredicted RBP11.16□□□□□ -0.62
LMO7-205ENST00000377534 RAD54L2Q9Y4B4 1467 aa11.16□□□□□ -0.62
LMO7-205ENST00000377534 POLA1P09884 1462 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms