RNA–Protein interactions for RNA: ENST00000587375.1

ATP6V0A1-212, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 4

Gene ATP6V0A1, Length 546 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-212ENST00000587375 NISCHQ9Y2I1 1504 aa20.55■□□□□ 0.88
ATP6V0A1-212ENST00000587375 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
ATP6V0A1-212ENST00000587375 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
ATP6V0A1-212ENST00000587375 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.55
ATP6V0A1-212ENST00000587375 ABCC9O60706 1549 aa17.98■□□□□ 0.47
ATP6V0A1-212ENST00000587375 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
ATP6V0A1-212ENST00000587375 NACADO15069 1562 aa17.38■□□□□ 0.37
ATP6V0A1-212ENST00000587375 MYO15BQ96JP2 1530 aa17.31■□□□□ 0.36
ATP6V0A1-212ENST00000587375 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
ATP6V0A1-212ENST00000587375 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
ATP6V0A1-212ENST00000587375 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
ATP6V0A1-212ENST00000587375 DCAF8L2P0C7V8 631 aa16.95■□□□□ 0.3
ATP6V0A1-212ENST00000587375 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
ATP6V0A1-212ENST00000587375 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
ATP6V0A1-212ENST00000587375 SENP3Q9H4L4 574 aaPredicted RBP16.71■□□□□ 0.27
ATP6V0A1-212ENST00000587375 SCRIBQ14160 1630 aa16.68■□□□□ 0.26
ATP6V0A1-212ENST00000587375 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATP6V0A1-212ENST00000587375 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
ATP6V0A1-212ENST00000587375 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
ATP6V0A1-212ENST00000587375 EIF4G1Q04637 1599 aaKnown RBP16.42■□□□□ 0.22
ATP6V0A1-212ENST00000587375 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
ATP6V0A1-212ENST00000587375 CECR2Q9BXF3 1484 aa16.25■□□□□ 0.19
ATP6V0A1-212ENST00000587375 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
ATP6V0A1-212ENST00000587375 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
ATP6V0A1-212ENST00000587375 SMARCA2P51531 1590 aa16■□□□□ 0.15
ATP6V0A1-212ENST00000587375 HMGXB3Q12766 1538 aa15.98■□□□□ 0.15
ATP6V0A1-212ENST00000587375 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
ATP6V0A1-212ENST00000587375 PEG3Q9GZU2 1588 aa15.94■□□□□ 0.14
ATP6V0A1-212ENST00000587375 ATAD2BQ9ULI0 1458 aa15.91■□□□□ 0.14
ATP6V0A1-212ENST00000587375 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
ATP6V0A1-212ENST00000587375 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
ATP6V0A1-212ENST00000587375 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
ATP6V0A1-212ENST00000587375 ERCC6Q03468 1493 aa15.61■□□□□ 0.09
ATP6V0A1-212ENST00000587375 CUX2O14529 1486 aa15.6■□□□□ 0.09
ATP6V0A1-212ENST00000587375 WIZO95785 1651 aa15.59■□□□□ 0.09
ATP6V0A1-212ENST00000587375 PLPPR3Q6T4P5 718 aa15.58■□□□□ 0.08
ATP6V0A1-212ENST00000587375 FOXD1Q16676 465 aa15.57■□□□□ 0.08
ATP6V0A1-212ENST00000587375 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
ATP6V0A1-212ENST00000587375 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.08
ATP6V0A1-212ENST00000587375 NESP48681 1621 aa15.49■□□□□ 0.07
ATP6V0A1-212ENST00000587375 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
ATP6V0A1-212ENST00000587375 THOC2Q8NI27 1593 aaKnown RBP15.46■□□□□ 0.07
ATP6V0A1-212ENST00000587375 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
ATP6V0A1-212ENST00000587375 POTEDQ86YR6 584 aa15.44■□□□□ 0.06
ATP6V0A1-212ENST00000587375 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
ATP6V0A1-212ENST00000587375 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
ATP6V0A1-212ENST00000587375 CFTRP13569 1480 aa15.37■□□□□ 0.05
ATP6V0A1-212ENST00000587375 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
ATP6V0A1-212ENST00000587375 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
ATP6V0A1-212ENST00000587375 WDR62O43379 1518 aa15.33■□□□□ 0.04
ATP6V0A1-212ENST00000587375 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
ATP6V0A1-212ENST00000587375 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
ATP6V0A1-212ENST00000587375 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
ATP6V0A1-212ENST00000587375 ABCC8Q09428 1581 aa15.13■□□□□ 0.01
ATP6V0A1-212ENST00000587375 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
ATP6V0A1-212ENST00000587375 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
ATP6V0A1-212ENST00000587375 TOPBP1Q92547 1522 aa15.02■□□□□ -0
ATP6V0A1-212ENST00000587375 IFT140Q96RY7 1462 aa15.02■□□□□ -0
ATP6V0A1-212ENST00000587375 WDR97A6NE52 1622 aa14.96□□□□□ -0.01
ATP6V0A1-212ENST00000587375 EIF4G3O43432 1585 aaKnown RBP14.91□□□□□ -0.02
ATP6V0A1-212ENST00000587375 TARBP1Q13395 1621 aaKnown RBP14.9□□□□□ -0.02
ATP6V0A1-212ENST00000587375 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
ATP6V0A1-212ENST00000587375 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
ATP6V0A1-212ENST00000587375 CUX1P39880 1505 aa14.82□□□□□ -0.04
ATP6V0A1-212ENST00000587375 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
ATP6V0A1-212ENST00000587375 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
ATP6V0A1-212ENST00000587375 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
ATP6V0A1-212ENST00000587375 SOGA1O94964 1423 aa14.76□□□□□ -0.05
ATP6V0A1-212ENST00000587375 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
ATP6V0A1-212ENST00000587375 TOP2BQ02880 1626 aa14.74□□□□□ -0.05
ATP6V0A1-212ENST00000587375 CHD1O14646 1710 aa14.73□□□□□ -0.05
ATP6V0A1-212ENST00000587375 MAGI1Q96QZ7 1491 aaPredicted RBP14.73□□□□□ -0.05
ATP6V0A1-212ENST00000587375 ABCA10Q8WWZ4 1543 aa14.72□□□□□ -0.05
ATP6V0A1-212ENST00000587375 RAD54L2Q9Y4B4 1467 aa14.71□□□□□ -0.05
ATP6V0A1-212ENST00000587375 PBRM1Q86U86 1689 aa14.71□□□□□ -0.06
ATP6V0A1-212ENST00000587375 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
ATP6V0A1-212ENST00000587375 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■■■ 53
ATP6V0A1-212ENST00000587375 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
ATP6V0A1-212ENST00000587375 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
ATP6V0A1-212ENST00000587375 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
ATP6V0A1-212ENST00000587375 SYNJ1O43426 1573 aa14.64□□□□□ -0.07
ATP6V0A1-212ENST00000587375 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
ATP6V0A1-212ENST00000587375 TDRD9Q8NDG6 1382 aaKnown RBP14.64□□□□□ -0.07
ATP6V0A1-212ENST00000587375 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
ATP6V0A1-212ENST00000587375 MSH5O43196 834 aa14.63□□□□□ -0.07
ATP6V0A1-212ENST00000587375 RIMBP3CA6NJZ7 1639 aa14.61□□□□□ -0.07
ATP6V0A1-212ENST00000587375 RIMBP3BA6NNM3 1639 aa14.61□□□□□ -0.07
ATP6V0A1-212ENST00000587375 RIMBP3Q9UFD9 1639 aa14.61□□□□□ -0.07
ATP6V0A1-212ENST00000587375 ARHGEF11O15085 1522 aa14.6□□□□□ -0.07
ATP6V0A1-212ENST00000587375 ERICH3Q5RHP9 1530 aa14.58□□□□□ -0.08
ATP6V0A1-212ENST00000587375 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.08
ATP6V0A1-212ENST00000587375 ADAMTS12P58397 1594 aa14.57□□□□□ -0.08
ATP6V0A1-212ENST00000587375 PIAS4Q8N2W9 510 aaPredicted RBP14.55□□□□□ -0.08
ATP6V0A1-212ENST00000587375 CHMP7Q8WUX9 453 aaPredicted RBP14.52□□□□□ -0.09
ATP6V0A1-212ENST00000587375 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
ATP6V0A1-212ENST00000587375 FBLN2P98095 1184 aa14.5□□□□□ -0.09
ATP6V0A1-212ENST00000587375 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
ATP6V0A1-212ENST00000587375 PPP6R1Q9UPN7 881 aa14.48□□□□□ -0.09
ATP6V0A1-212ENST00000587375 ADRA2BP18089 450 aa14.47□□□□□ -0.09
ATP6V0A1-212ENST00000587375 CUL7Q14999 1698 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms