RNA–Protein interactions for RNA: ENST00000447038.5

LMO7-206, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-206ENST00000447038 NISCHQ9Y2I1 1504 aa21.55■■□□□ 1.04
LMO7-206ENST00000447038 CCDC180Q9P1Z9 1646 aa19.17■□□□□ 0.66
LMO7-206ENST00000447038 ZCCHC6Q5VYS8 1495 aaKnown RBP18.1■□□□□ 0.49
LMO7-206ENST00000447038 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
LMO7-206ENST00000447038 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
LMO7-206ENST00000447038 ABCC9O60706 1549 aa17.95■□□□□ 0.46
LMO7-206ENST00000447038 NACADO15069 1562 aa17.82■□□□□ 0.44
LMO7-206ENST00000447038 DCAF8L2P0C7V8 631 aa17.69■□□□□ 0.42
LMO7-206ENST00000447038 RB1CC1Q8TDY2 1594 aa17.68■□□□□ 0.42
LMO7-206ENST00000447038 UNC13AQ9UPW8 1703 aa17.41■□□□□ 0.38
LMO7-206ENST00000447038 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
LMO7-206ENST00000447038 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
LMO7-206ENST00000447038 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
LMO7-206ENST00000447038 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.26
LMO7-206ENST00000447038 BAZ1AQ9NRL2 1556 aaPredicted RBP16.68■□□□□ 0.26
LMO7-206ENST00000447038 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
LMO7-206ENST00000447038 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
LMO7-206ENST00000447038 PEG3Q9GZU2 1588 aa16.65■□□□□ 0.26
LMO7-206ENST00000447038 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
LMO7-206ENST00000447038 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
LMO7-206ENST00000447038 MROH2BQ7Z745 1585 aa16.56■□□□□ 0.24
LMO7-206ENST00000447038 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
LMO7-206ENST00000447038 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
LMO7-206ENST00000447038 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
LMO7-206ENST00000447038 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
LMO7-206ENST00000447038 WIZO95785 1651 aa16.41■□□□□ 0.22
LMO7-206ENST00000447038 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
LMO7-206ENST00000447038 NCAPD3P42695 1498 aa16.39■□□□□ 0.22
LMO7-206ENST00000447038 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
LMO7-206ENST00000447038 BAZ1BQ9UIG0 1483 aaKnown RBP16.22■□□□□ 0.19
LMO7-206ENST00000447038 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LMO7-206ENST00000447038 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
LMO7-206ENST00000447038 PRDM2Q13029 1718 aa16.02■□□□□ 0.15
LMO7-206ENST00000447038 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
LMO7-206ENST00000447038 CFTRP13569 1480 aa15.91■□□□□ 0.14
LMO7-206ENST00000447038 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
LMO7-206ENST00000447038 NESP48681 1621 aa15.71■□□□□ 0.11
LMO7-206ENST00000447038 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
LMO7-206ENST00000447038 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
LMO7-206ENST00000447038 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
LMO7-206ENST00000447038 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
LMO7-206ENST00000447038 BIVM-ERCC5R4GMW8 1640 aa15.64■□□□□ 0.09
LMO7-206ENST00000447038 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
LMO7-206ENST00000447038 CEP164Q9UPV0 1460 aa15.58■□□□□ 0.09
LMO7-206ENST00000447038 TOP2BQ02880 1626 aa15.58■□□□□ 0.08
LMO7-206ENST00000447038 WDR62O43379 1518 aa15.58■□□□□ 0.08
LMO7-206ENST00000447038 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
LMO7-206ENST00000447038 ABCC8Q09428 1581 aa15.55■□□□□ 0.08
LMO7-206ENST00000447038 CUX1P39880 1505 aa15.54■□□□□ 0.08
LMO7-206ENST00000447038 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
LMO7-206ENST00000447038 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
LMO7-206ENST00000447038 SYNJ1O43426 1573 aa15.53■□□□□ 0.08
LMO7-206ENST00000447038 URB2Q14146 1524 aaKnown RBP15.52■□□□□ 0.07
LMO7-206ENST00000447038 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
LMO7-206ENST00000447038 TOPBP1Q92547 1522 aa15.48■□□□□ 0.07
LMO7-206ENST00000447038 FAM9AQ8IZU1 332 aaPredicted RBP15.47■□□□□ 0.07
LMO7-206ENST00000447038 WDR97A6NE52 1622 aa15.46■□□□□ 0.07
LMO7-206ENST00000447038 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
LMO7-206ENST00000447038 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
LMO7-206ENST00000447038 TARBP1Q13395 1621 aaKnown RBP15.4■□□□□ 0.06
LMO7-206ENST00000447038 CUX2O14529 1486 aa15.36■□□□□ 0.05
LMO7-206ENST00000447038 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
LMO7-206ENST00000447038 FGD5Q6ZNL6 1462 aa15.35■□□□□ 0.05
LMO7-206ENST00000447038 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.04
LMO7-206ENST00000447038 ABCA5Q8WWZ7 1642 aa15.3■□□□□ 0.04
LMO7-206ENST00000447038 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
LMO7-206ENST00000447038 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
LMO7-206ENST00000447038 SOGA1O94964 1423 aa15.22■□□□□ 0.03
LMO7-206ENST00000447038 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
LMO7-206ENST00000447038 PBRM1Q86U86 1689 aa15.2■□□□□ 0.02
LMO7-206ENST00000447038 EEA1Q15075 1411 aa15.2■□□□□ 0.02
LMO7-206ENST00000447038 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
LMO7-206ENST00000447038 ERICH3Q5RHP9 1530 aa15.18■□□□□ 0.02
LMO7-206ENST00000447038 CUL7Q14999 1698 aa15.13■□□□□ 0.01
LMO7-206ENST00000447038 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
LMO7-206ENST00000447038 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
LMO7-206ENST00000447038 GAPVD1Q14C86 1478 aa15.09■□□□□ 0.01
LMO7-206ENST00000447038 KIF21BO75037 1637 aa15.09■□□□□ 0.01
LMO7-206ENST00000447038 RUSC2Q8N2Y8 1516 aa15.08■□□□□ 0.01
LMO7-206ENST00000447038 ADAMTS12P58397 1594 aa15.07■□□□□ 0
LMO7-206ENST00000447038 GRIN2BQ13224 1484 aa15.07■□□□□ 0
LMO7-206ENST00000447038 PRXQ9BXM0 1461 aa15.05■□□□□ 0
LMO7-206ENST00000447038 MAGI1Q96QZ7 1491 aaPredicted RBP15.05■□□□□ -0
LMO7-206ENST00000447038 IGF1RP08069 1367 aa15.04■□□□□ -0
LMO7-206ENST00000447038 AQRO60306 1485 aaKnown RBP eCLIP15.02□□□□□ -0.011e-9■□□□□ 10.7
LMO7-206ENST00000447038 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
LMO7-206ENST00000447038 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
LMO7-206ENST00000447038 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
LMO7-206ENST00000447038 RANGAP1P46060 587 aaPredicted RBP14.96□□□□□ -0.01
LMO7-206ENST00000447038 SNAPC4Q5SXM2 1469 aa14.96□□□□□ -0.01
LMO7-206ENST00000447038 CSRNP3Q8WYN3 585 aa14.96□□□□□ -0.01
LMO7-206ENST00000447038 SYNJ2O15056 1496 aa14.95□□□□□ -0.02
LMO7-206ENST00000447038 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
LMO7-206ENST00000447038 CHD1O14646 1710 aa14.92□□□□□ -0.02
LMO7-206ENST00000447038 CTTNBP2Q8WZ74 1663 aa14.91□□□□□ -0.02
LMO7-206ENST00000447038 CARMIL1Q5VZK9 1371 aa14.89□□□□□ -0.03
LMO7-206ENST00000447038 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
LMO7-206ENST00000447038 GOLGA3Q08378 1498 aa14.87□□□□□ -0.03
LMO7-206ENST00000447038 NUP160Q12769 1436 aa14.87□□□□□ -0.03
LMO7-206ENST00000447038 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms