RNA–Protein interactions for RNA: ENST00000602708.1

DENND4C-208, Transcript of DENN domain containing 4C, humanhuman

TSL 4

Gene DENND4C, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4C-208ENST00000602708 AEBP2Q6ZN18 517 aaPredicted RBP27.62■■■□□ 2.01
DENND4C-208ENST00000602708 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
DENND4C-208ENST00000602708 SENP3Q9H4L4 574 aaPredicted RBP23.36■■□□□ 1.33
DENND4C-208ENST00000602708 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
DENND4C-208ENST00000602708 FOXD1Q16676 465 aa21.88■■□□□ 1.09
DENND4C-208ENST00000602708 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
DENND4C-208ENST00000602708 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
DENND4C-208ENST00000602708 ADRA2BP18089 450 aa20.49■□□□□ 0.87
DENND4C-208ENST00000602708 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
DENND4C-208ENST00000602708 MSH5O43196 834 aa20.31■□□□□ 0.84
DENND4C-208ENST00000602708 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
DENND4C-208ENST00000602708 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
DENND4C-208ENST00000602708 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
DENND4C-208ENST00000602708 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
DENND4C-208ENST00000602708 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
DENND4C-208ENST00000602708 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
DENND4C-208ENST00000602708 HOXD11P31277 338 aaPredicted RBP17.94■□□□□ 0.46
DENND4C-208ENST00000602708 DCAF8L1A6NGE4 600 aa17.8■□□□□ 0.44
DENND4C-208ENST00000602708 RNF216Q9NWF9 866 aaPredicted RBP17.79■□□□□ 0.44
DENND4C-208ENST00000602708 NCBP3Q53F19 620 aaKnown RBP17.58■□□□□ 0.4
DENND4C-208ENST00000602708 NPM3O75607 178 aaKnown RBP17.48■□□□□ 0.39
DENND4C-208ENST00000602708 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
DENND4C-208ENST00000602708 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
DENND4C-208ENST00000602708 KCNA4P22459 653 aa17.25■□□□□ 0.35
DENND4C-208ENST00000602708 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
DENND4C-208ENST00000602708 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
DENND4C-208ENST00000602708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.05■□□□□ 0.321e-6■□□□□ 10.7
DENND4C-208ENST00000602708 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
DENND4C-208ENST00000602708 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
DENND4C-208ENST00000602708 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
DENND4C-208ENST00000602708 CAPN15O75808 1086 aa16.41■□□□□ 0.22
DENND4C-208ENST00000602708 DSG3P32926 999 aa16.35■□□□□ 0.21
DENND4C-208ENST00000602708 SLC4A1APQ9BWU0 796 aaKnown RBP16.22■□□□□ 0.19
DENND4C-208ENST00000602708 TRHP20396 242 aaPredicted RBP16.2■□□□□ 0.18
DENND4C-208ENST00000602708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
DENND4C-208ENST00000602708 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
DENND4C-208ENST00000602708 ABCB7O75027 752 aa16.12■□□□□ 0.17
DENND4C-208ENST00000602708 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
DENND4C-208ENST00000602708 APLP2Q06481 763 aa16.09■□□□□ 0.17
DENND4C-208ENST00000602708 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
DENND4C-208ENST00000602708 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
DENND4C-208ENST00000602708 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
DENND4C-208ENST00000602708 ZBTB22O15209 634 aa15.93■□□□□ 0.14
DENND4C-208ENST00000602708 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
DENND4C-208ENST00000602708 POLA2Q14181 598 aa15.79■□□□□ 0.12
DENND4C-208ENST00000602708 POTEHQ6S545 545 aa15.51■□□□□ 0.07
DENND4C-208ENST00000602708 RBM42Q9BTD8 480 aaKnown RBP15.46■□□□□ 0.07
DENND4C-208ENST00000602708 ATXN8OSP0DMR3 200 aa15.43■□□□□ 0.06
DENND4C-208ENST00000602708 ZBTB12Q9Y330 459 aaPredicted RBP15.34■□□□□ 0.05
DENND4C-208ENST00000602708 OSCARQ8IYS5 282 aa15.31■□□□□ 0.04
DENND4C-208ENST00000602708 CSRNP3Q8WYN3 585 aa15.21■□□□□ 0.03
DENND4C-208ENST00000602708 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
DENND4C-208ENST00000602708 AKT1S1Q96B36 256 aa15.18■□□□□ 0.02
DENND4C-208ENST00000602708 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
DENND4C-208ENST00000602708 REM2Q8IYK8 340 aaPredicted RBP15.1■□□□□ 0.01
DENND4C-208ENST00000602708 EHMT2Q96KQ7 1210 aa15.04■□□□□ -0
DENND4C-208ENST00000602708 FBLN2P98095 1184 aa15.03■□□□□ -0
DENND4C-208ENST00000602708 PITPNM1O00562 1244 aa14.96□□□□□ -0.01
DENND4C-208ENST00000602708 SPDYE2BA6NHP3 402 aa14.94□□□□□ -0.02
DENND4C-208ENST00000602708 SPDYE6P0CI01 402 aa14.94□□□□□ -0.02
DENND4C-208ENST00000602708 SPDYE2Q495Y8 402 aa14.94□□□□□ -0.02
DENND4C-208ENST00000602708 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
DENND4C-208ENST00000602708 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
DENND4C-208ENST00000602708 ZNF692Q9BU19 519 aaPredicted RBP14.8□□□□□ -0.04
DENND4C-208ENST00000602708 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
DENND4C-208ENST00000602708 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
DENND4C-208ENST00000602708 SPDYE1Q8NFV5 336 aaPredicted RBP14.65□□□□□ -0.06
DENND4C-208ENST00000602708 PABPN1Q86U42 306 aaKnown RBP eCLIP14.61□□□□□ -0.07
DENND4C-208ENST00000602708 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
DENND4C-208ENST00000602708 HAX1O00165 279 aa14.54□□□□□ -0.08
DENND4C-208ENST00000602708 PRKAR2AP13861 404 aaKnown RBP14.54□□□□□ -0.08
DENND4C-208ENST00000602708 EVX2Q03828 476 aa14.51□□□□□ -0.09
DENND4C-208ENST00000602708 CHADLQ6NUI6 762 aa14.46□□□□□ -0.09
DENND4C-208ENST00000602708 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
DENND4C-208ENST00000602708 SPDYE4A6NLX3 237 aa14.34□□□□□ -0.11
DENND4C-208ENST00000602708 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
DENND4C-208ENST00000602708 FARP1Q9Y4F1 1045 aaPredicted RBP14.19□□□□□ -0.14
DENND4C-208ENST00000602708 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
DENND4C-208ENST00000602708 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
DENND4C-208ENST00000602708 GABBR2O75899 941 aa14.09□□□□□ -0.15
DENND4C-208ENST00000602708 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
DENND4C-208ENST00000602708 PROM2Q8N271 834 aa14.06□□□□□ -0.16
DENND4C-208ENST00000602708 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
DENND4C-208ENST00000602708 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
DENND4C-208ENST00000602708 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
DENND4C-208ENST00000602708 ZNF579Q8NAF0 562 aaKnown RBP13.86□□□□□ -0.19
DENND4C-208ENST00000602708 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
DENND4C-208ENST00000602708 GALR2O43603 387 aaPredicted RBP13.75□□□□□ -0.21
DENND4C-208ENST00000602708 NPM1P06748 294 aaKnown RBP eCLIP13.75□□□□□ -0.21
DENND4C-208ENST00000602708 FKBP8Q14318 412 aa13.74□□□□□ -0.21
DENND4C-208ENST00000602708 CLCN6P51797 869 aa13.71□□□□□ -0.21
DENND4C-208ENST00000602708 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
DENND4C-208ENST00000602708 LHX8Q68G74 356 aa13.65□□□□□ -0.22
DENND4C-208ENST00000602708 MIER1Q8N108 512 aa13.65□□□□□ -0.22
DENND4C-208ENST00000602708 DCBLD2Q96PD2 775 aa13.65□□□□□ -0.22
DENND4C-208ENST00000602708 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
DENND4C-208ENST00000602708 RASEFQ8IZ41 740 aa13.57□□□□□ -0.24
DENND4C-208ENST00000602708 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
DENND4C-208ENST00000602708 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
DENND4C-208ENST00000602708 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms