Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNCAIPQ9Y6H5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
SNCAIPQ9Y6H5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.44■■■□□ 2.46
SNCAIPQ9Y6H5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
SNCAIPQ9Y6H5 AC135983.2-203ENST00000454486 1613 ntBASIC30.43■■■□□ 2.46
SNCAIPQ9Y6H5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 AC012354.3-201ENST00000623734 483 ntBASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNCAIPQ9Y6H5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
SNCAIPQ9Y6H5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
SNCAIPQ9Y6H5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.39■■■□□ 2.46
SNCAIPQ9Y6H5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SNCAIPQ9Y6H5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNCAIPQ9Y6H5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.38■■■□□ 2.45
SNCAIPQ9Y6H5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNCAIPQ9Y6H5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SNCAIPQ9Y6H5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNCAIPQ9Y6H5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.36■■■□□ 2.45
SNCAIPQ9Y6H5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNCAIPQ9Y6H5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
SNCAIPQ9Y6H5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SNCAIPQ9Y6H5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.34■■■□□ 2.45
SNCAIPQ9Y6H5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.34■■■□□ 2.45
SNCAIPQ9Y6H5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SNCAIPQ9Y6H5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNCAIPQ9Y6H5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SNCAIPQ9Y6H5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SNCAIPQ9Y6H5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNCAIPQ9Y6H5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNCAIPQ9Y6H5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
SNCAIPQ9Y6H5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
SNCAIPQ9Y6H5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SNCAIPQ9Y6H5 AC060814.1-201ENST00000554326 538 ntBASIC30.29■■■□□ 2.44
SNCAIPQ9Y6H5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SNCAIPQ9Y6H5 AC110285.7-201ENST00000624417 1536 ntBASIC30.28■■■□□ 2.44
SNCAIPQ9Y6H5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SNCAIPQ9Y6H5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SNCAIPQ9Y6H5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SNCAIPQ9Y6H5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
SNCAIPQ9Y6H5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.26■■■□□ 2.44
SNCAIPQ9Y6H5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SNCAIPQ9Y6H5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.26■■■□□ 2.43
SNCAIPQ9Y6H5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SNCAIPQ9Y6H5 AC148477.6-201ENST00000623746 465 ntBASIC30.26■■■□□ 2.43
SNCAIPQ9Y6H5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SNCAIPQ9Y6H5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.25■■■□□ 2.43
SNCAIPQ9Y6H5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SNCAIPQ9Y6H5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SNCAIPQ9Y6H5 U85056.1-201ENST00000616429 682 ntBASIC30.25■■■□□ 2.43
SNCAIPQ9Y6H5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SNCAIPQ9Y6H5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNCAIPQ9Y6H5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SNCAIPQ9Y6H5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SNCAIPQ9Y6H5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.23■■■□□ 2.43
SNCAIPQ9Y6H5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SNCAIPQ9Y6H5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SNCAIPQ9Y6H5 AL033527.3-201ENST00000566366 1196 ntBASIC30.22■■■□□ 2.43
SNCAIPQ9Y6H5 AC018358.1-201ENST00000631079 1402 ntBASIC30.22■■■□□ 2.43
SNCAIPQ9Y6H5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SNCAIPQ9Y6H5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
SNCAIPQ9Y6H5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
SNCAIPQ9Y6H5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.2■■■□□ 2.42
SNCAIPQ9Y6H5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.19■■■□□ 2.42
SNCAIPQ9Y6H5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SNCAIPQ9Y6H5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.19■■■□□ 2.42
SNCAIPQ9Y6H5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
SNCAIPQ9Y6H5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.17■■■□□ 2.42
SNCAIPQ9Y6H5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.17■■■□□ 2.42
SNCAIPQ9Y6H5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.16■■■□□ 2.42
SNCAIPQ9Y6H5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.16■■■□□ 2.42
SNCAIPQ9Y6H5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SNCAIPQ9Y6H5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNCAIPQ9Y6H5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SNCAIPQ9Y6H5 AL135925.1-201ENST00000605920 1701 ntBASIC30.14■■■□□ 2.42
SNCAIPQ9Y6H5 MIR219A2-201ENST00000608502 1504 ntBASIC30.14■■■□□ 2.42
SNCAIPQ9Y6H5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
SNCAIPQ9Y6H5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNCAIPQ9Y6H5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
SNCAIPQ9Y6H5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
SNCAIPQ9Y6H5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNCAIPQ9Y6H5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SNCAIPQ9Y6H5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SNCAIPQ9Y6H5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.12■■■□□ 2.41
SNCAIPQ9Y6H5 AC092296.2-201ENST00000589470 999 ntBASIC30.12■■■□□ 2.41
SNCAIPQ9Y6H5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SNCAIPQ9Y6H5 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SNCAIPQ9Y6H5 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SNCAIPQ9Y6H5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
SNCAIPQ9Y6H5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SNCAIPQ9Y6H5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNCAIPQ9Y6H5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms