Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA4Q9UN74 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.53■■■□□ 2.32
PCDHA4Q9UN74 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
PCDHA4Q9UN74 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.51■■■□□ 2.31
PCDHA4Q9UN74 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHA4Q9UN74 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.5■■■□□ 2.31
PCDHA4Q9UN74 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.5■■■□□ 2.31
PCDHA4Q9UN74 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.5■■■□□ 2.31
PCDHA4Q9UN74 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHA4Q9UN74 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA4Q9UN74 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.49■■■□□ 2.31
PCDHA4Q9UN74 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA4Q9UN74 ABHD17AP4-201ENST00000411545 909 ntBASIC29.49■■■□□ 2.31
PCDHA4Q9UN74 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
PCDHA4Q9UN74 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHA4Q9UN74 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.48■■■□□ 2.31
PCDHA4Q9UN74 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.48■■■□□ 2.31
PCDHA4Q9UN74 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.48■■■□□ 2.31
PCDHA4Q9UN74 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHA4Q9UN74 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA4Q9UN74 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA4Q9UN74 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA4Q9UN74 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.46■■■□□ 2.31
PCDHA4Q9UN74 ZNRF2P2-203ENST00000454624 420 ntBASIC29.46■■■□□ 2.31
PCDHA4Q9UN74 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHA4Q9UN74 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDHA4Q9UN74 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.45■■■□□ 2.31
PCDHA4Q9UN74 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.45■■■□□ 2.31
PCDHA4Q9UN74 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 AC100797.4-201ENST00000631653 1827 ntBASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
PCDHA4Q9UN74 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA4Q9UN74 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA4Q9UN74 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.42■■■□□ 2.3
PCDHA4Q9UN74 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDHA4Q9UN74 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.41■■■□□ 2.3
PCDHA4Q9UN74 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA4Q9UN74 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC29.41■■■□□ 2.3
PCDHA4Q9UN74 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
PCDHA4Q9UN74 LINC01971-201ENST00000617888 1048 ntBASIC29.4■■■□□ 2.3
PCDHA4Q9UN74 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA4Q9UN74 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA4Q9UN74 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA4Q9UN74 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
PCDHA4Q9UN74 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.38■■■□□ 2.29
PCDHA4Q9UN74 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PCDHA4Q9UN74 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.37■■■□□ 2.29
PCDHA4Q9UN74 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA4Q9UN74 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA4Q9UN74 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
PCDHA4Q9UN74 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA4Q9UN74 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA4Q9UN74 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA4Q9UN74 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA4Q9UN74 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA4Q9UN74 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA4Q9UN74 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA4Q9UN74 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA4Q9UN74 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA4Q9UN74 DRD5P2-201ENST00000421395 2012 ntBASIC29.33■■■□□ 2.29
PCDHA4Q9UN74 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.33■■■□□ 2.29
PCDHA4Q9UN74 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA4Q9UN74 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.32■■■□□ 2.28
PCDHA4Q9UN74 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA4Q9UN74 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.31■■■□□ 2.28
PCDHA4Q9UN74 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.3■■■□□ 2.28
PCDHA4Q9UN74 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA4Q9UN74 DUX4L11-201ENST00000611504 1267 ntBASIC29.29■■■□□ 2.28
PCDHA4Q9UN74 DUX4L12-201ENST00000614593 1267 ntBASIC29.29■■■□□ 2.28
PCDHA4Q9UN74 DUX4L14-201ENST00000621227 1267 ntBASIC29.29■■■□□ 2.28
PCDHA4Q9UN74 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
PCDHA4Q9UN74 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHA4Q9UN74 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHA4Q9UN74 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
PCDHA4Q9UN74 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA4Q9UN74 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.26■■■□□ 2.27
PCDHA4Q9UN74 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA4Q9UN74 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
PCDHA4Q9UN74 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L13-201ENST00000554103 1267 ntBASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L15-201ENST00000611059 1267 ntBASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L23-201ENST00000615195 1269 ntBASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L24-201ENST00000617576 1269 ntBASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L22-201ENST00000618238 1269 ntBASIC29.24■■■□□ 2.27
PCDHA4Q9UN74 DUX4L20-201ENST00000619712 1269 ntBASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms