Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
BLOC1S4Q9NUP1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
BLOC1S4Q9NUP1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.74■■■□□ 2.19
BLOC1S4Q9NUP1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
BLOC1S4Q9NUP1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
BLOC1S4Q9NUP1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
BLOC1S4Q9NUP1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
BLOC1S4Q9NUP1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
BLOC1S4Q9NUP1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.71■■■□□ 2.19
BLOC1S4Q9NUP1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
BLOC1S4Q9NUP1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
BLOC1S4Q9NUP1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
BLOC1S4Q9NUP1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
BLOC1S4Q9NUP1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
BLOC1S4Q9NUP1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
BLOC1S4Q9NUP1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
BLOC1S4Q9NUP1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
BLOC1S4Q9NUP1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.7■■■□□ 2.18
BLOC1S4Q9NUP1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 DUX4L29-201ENST00000425409 679 ntBASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.69■■■□□ 2.18
BLOC1S4Q9NUP1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.68■■■□□ 2.18
BLOC1S4Q9NUP1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BLOC1S4Q9NUP1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
BLOC1S4Q9NUP1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
BLOC1S4Q9NUP1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
BLOC1S4Q9NUP1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
BLOC1S4Q9NUP1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.66■■■□□ 2.18
BLOC1S4Q9NUP1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
BLOC1S4Q9NUP1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.65■■■□□ 2.18
BLOC1S4Q9NUP1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.64■■■□□ 2.18
BLOC1S4Q9NUP1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.64■■■□□ 2.17
BLOC1S4Q9NUP1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.64■■■□□ 2.17
BLOC1S4Q9NUP1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.64■■■□□ 2.17
BLOC1S4Q9NUP1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BLOC1S4Q9NUP1 AC142086.6-201ENST00000621154 1765 ntBASIC28.63■■■□□ 2.17
BLOC1S4Q9NUP1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
BLOC1S4Q9NUP1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
BLOC1S4Q9NUP1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.62■■■□□ 2.17
BLOC1S4Q9NUP1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.61■■■□□ 2.17
BLOC1S4Q9NUP1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
BLOC1S4Q9NUP1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.61■■■□□ 2.17
BLOC1S4Q9NUP1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
BLOC1S4Q9NUP1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
BLOC1S4Q9NUP1 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.6■■■□□ 2.17
BLOC1S4Q9NUP1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.6■■■□□ 2.17
BLOC1S4Q9NUP1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.6■■■□□ 2.17
BLOC1S4Q9NUP1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.59■■■□□ 2.17
BLOC1S4Q9NUP1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
BLOC1S4Q9NUP1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.57■■■□□ 2.16
BLOC1S4Q9NUP1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.57■■■□□ 2.16
BLOC1S4Q9NUP1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.57■■■□□ 2.16
BLOC1S4Q9NUP1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.57■■■□□ 2.16
BLOC1S4Q9NUP1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
BLOC1S4Q9NUP1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
BLOC1S4Q9NUP1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.55■■■□□ 2.16
BLOC1S4Q9NUP1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.55■■■□□ 2.16
BLOC1S4Q9NUP1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
BLOC1S4Q9NUP1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
BLOC1S4Q9NUP1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.53■■■□□ 2.16
BLOC1S4Q9NUP1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
BLOC1S4Q9NUP1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
BLOC1S4Q9NUP1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
BLOC1S4Q9NUP1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
BLOC1S4Q9NUP1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
BLOC1S4Q9NUP1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.51■■■□□ 2.15
BLOC1S4Q9NUP1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
BLOC1S4Q9NUP1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
BLOC1S4Q9NUP1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
BLOC1S4Q9NUP1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
BLOC1S4Q9NUP1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
BLOC1S4Q9NUP1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
BLOC1S4Q9NUP1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.5■■■□□ 2.15
BLOC1S4Q9NUP1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
BLOC1S4Q9NUP1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
BLOC1S4Q9NUP1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC28.49■■■□□ 2.15
BLOC1S4Q9NUP1 AP002414.2-202ENST00000590929 1450 ntBASIC28.48■■■□□ 2.15
BLOC1S4Q9NUP1 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
BLOC1S4Q9NUP1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
BLOC1S4Q9NUP1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.48■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms