Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.53■■■□□ 2
CISHQ9NSE2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.52■■■□□ 2
CISHQ9NSE2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.52■■■□□ 2
CISHQ9NSE2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.52■■■□□ 2
CISHQ9NSE2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CISHQ9NSE2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
CISHQ9NSE2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CISHQ9NSE2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.5■■□□□ 1.99
CISHQ9NSE2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
CISHQ9NSE2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CISHQ9NSE2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.49■■□□□ 1.99
CISHQ9NSE2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.49■■□□□ 1.99
CISHQ9NSE2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.49■■□□□ 1.99
CISHQ9NSE2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CISHQ9NSE2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CISHQ9NSE2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CISHQ9NSE2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CISHQ9NSE2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CISHQ9NSE2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.47■■□□□ 1.99
CISHQ9NSE2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.47■■□□□ 1.99
CISHQ9NSE2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CISHQ9NSE2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
CISHQ9NSE2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CISHQ9NSE2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CISHQ9NSE2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.47■■□□□ 1.99
CISHQ9NSE2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
CISHQ9NSE2 ABHD17AP4-201ENST00000411545 909 ntBASIC27.46■■□□□ 1.99
CISHQ9NSE2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CISHQ9NSE2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CISHQ9NSE2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CISHQ9NSE2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC27.45■■□□□ 1.98
CISHQ9NSE2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
CISHQ9NSE2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
CISHQ9NSE2 AC100797.4-201ENST00000631653 1827 ntBASIC27.44■■□□□ 1.98
CISHQ9NSE2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
CISHQ9NSE2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.44■■□□□ 1.98
CISHQ9NSE2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.44■■□□□ 1.98
CISHQ9NSE2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
CISHQ9NSE2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.43■■□□□ 1.98
CISHQ9NSE2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.43■■□□□ 1.98
CISHQ9NSE2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
CISHQ9NSE2 ZNRF2P2-203ENST00000454624 420 ntBASIC27.43■■□□□ 1.98
CISHQ9NSE2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
CISHQ9NSE2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.42■■□□□ 1.98
CISHQ9NSE2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CISHQ9NSE2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.41■■□□□ 1.98
CISHQ9NSE2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CISHQ9NSE2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CISHQ9NSE2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.4■■□□□ 1.98
CISHQ9NSE2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CISHQ9NSE2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
CISHQ9NSE2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CISHQ9NSE2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CISHQ9NSE2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CISHQ9NSE2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CISHQ9NSE2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CISHQ9NSE2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.38■■□□□ 1.97
CISHQ9NSE2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.38■■□□□ 1.97
CISHQ9NSE2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.37■■□□□ 1.97
CISHQ9NSE2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
CISHQ9NSE2 LINC01971-201ENST00000617888 1048 ntBASIC27.37■■□□□ 1.97
CISHQ9NSE2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CISHQ9NSE2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CISHQ9NSE2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
CISHQ9NSE2 DRD5P2-201ENST00000421395 2012 ntBASIC27.35■■□□□ 1.97
CISHQ9NSE2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CISHQ9NSE2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CISHQ9NSE2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CISHQ9NSE2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CISHQ9NSE2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CISHQ9NSE2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
CISHQ9NSE2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.33■■□□□ 1.97
CISHQ9NSE2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CISHQ9NSE2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CISHQ9NSE2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CISHQ9NSE2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CISHQ9NSE2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CISHQ9NSE2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.31■■□□□ 1.96
CISHQ9NSE2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CISHQ9NSE2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.3■■□□□ 1.96
CISHQ9NSE2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.3■■□□□ 1.96
CISHQ9NSE2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.29■■□□□ 1.96
CISHQ9NSE2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CISHQ9NSE2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CISHQ9NSE2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CISHQ9NSE2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.28■■□□□ 1.96
CISHQ9NSE2 DUX4L11-201ENST00000611504 1267 ntBASIC27.28■■□□□ 1.96
CISHQ9NSE2 DUX4L12-201ENST00000614593 1267 ntBASIC27.28■■□□□ 1.96
CISHQ9NSE2 DUX4L14-201ENST00000621227 1267 ntBASIC27.28■■□□□ 1.96
CISHQ9NSE2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CISHQ9NSE2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CISHQ9NSE2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CISHQ9NSE2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CISHQ9NSE2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CISHQ9NSE2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CISHQ9NSE2 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.24■■□□□ 1.95
CISHQ9NSE2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CISHQ9NSE2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CISHQ9NSE2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
CISHQ9NSE2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms