Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
RC3H2Q9HBD1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H2Q9HBD1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
RC3H2Q9HBD1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H2Q9HBD1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RC3H2Q9HBD1 NTF6A-201ENST00000591175 560 ntBASIC27.92■■■□□ 2.06
RC3H2Q9HBD1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.91■■■□□ 2.06
RC3H2Q9HBD1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.9■■■□□ 2.06
RC3H2Q9HBD1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
RC3H2Q9HBD1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RC3H2Q9HBD1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RC3H2Q9HBD1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.89■■■□□ 2.06
RC3H2Q9HBD1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RC3H2Q9HBD1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
RC3H2Q9HBD1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
RC3H2Q9HBD1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.87■■■□□ 2.05
RC3H2Q9HBD1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
RC3H2Q9HBD1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
RC3H2Q9HBD1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.87■■■□□ 2.05
RC3H2Q9HBD1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
RC3H2Q9HBD1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H2Q9HBD1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H2Q9HBD1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
RC3H2Q9HBD1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.85■■■□□ 2.05
RC3H2Q9HBD1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
RC3H2Q9HBD1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
RC3H2Q9HBD1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
RC3H2Q9HBD1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.83■■■□□ 2.05
RC3H2Q9HBD1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RC3H2Q9HBD1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RC3H2Q9HBD1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H2Q9HBD1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H2Q9HBD1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H2Q9HBD1 AC012354.3-201ENST00000623734 483 ntBASIC27.82■■■□□ 2.04
RC3H2Q9HBD1 AC148477.6-201ENST00000623746 465 ntBASIC27.82■■■□□ 2.04
RC3H2Q9HBD1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H2Q9HBD1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
RC3H2Q9HBD1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
RC3H2Q9HBD1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.79■■■□□ 2.04
RC3H2Q9HBD1 AC060814.1-201ENST00000554326 538 ntBASIC27.79■■■□□ 2.04
RC3H2Q9HBD1 AC110285.7-201ENST00000624417 1536 ntBASIC27.78■■■□□ 2.04
RC3H2Q9HBD1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
RC3H2Q9HBD1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
RC3H2Q9HBD1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
RC3H2Q9HBD1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
RC3H2Q9HBD1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 AL135925.1-201ENST00000605920 1701 ntBASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.73■■■□□ 2.03
RC3H2Q9HBD1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RC3H2Q9HBD1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RC3H2Q9HBD1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
RC3H2Q9HBD1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RC3H2Q9HBD1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
RC3H2Q9HBD1 U85056.1-201ENST00000616429 682 ntBASIC27.71■■■□□ 2.03
RC3H2Q9HBD1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RC3H2Q9HBD1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RC3H2Q9HBD1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RC3H2Q9HBD1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RC3H2Q9HBD1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RC3H2Q9HBD1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RC3H2Q9HBD1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
RC3H2Q9HBD1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RC3H2Q9HBD1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.69■■■□□ 2.02
RC3H2Q9HBD1 AC018358.1-201ENST00000631079 1402 ntBASIC27.68■■■□□ 2.02
RC3H2Q9HBD1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.68■■■□□ 2.02
RC3H2Q9HBD1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 AC092296.2-201ENST00000589470 999 ntBASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 MIR219A2-201ENST00000608502 1504 ntBASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.67■■■□□ 2.02
RC3H2Q9HBD1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.66■■■□□ 2.02
RC3H2Q9HBD1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RC3H2Q9HBD1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.66■■■□□ 2.02
RC3H2Q9HBD1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RC3H2Q9HBD1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
RC3H2Q9HBD1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
RC3H2Q9HBD1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RC3H2Q9HBD1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RC3H2Q9HBD1 AL033527.3-201ENST00000566366 1196 ntBASIC27.63■■■□□ 2.01
RC3H2Q9HBD1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
RC3H2Q9HBD1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
RC3H2Q9HBD1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.63■■■□□ 2.01
RC3H2Q9HBD1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
RC3H2Q9HBD1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RC3H2Q9HBD1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
RC3H2Q9HBD1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.62■■■□□ 2.01
RC3H2Q9HBD1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
RC3H2Q9HBD1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RC3H2Q9HBD1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
RC3H2Q9HBD1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.61■■■□□ 2.01
RC3H2Q9HBD1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms