Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNX25Q9H3E2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.46■■□□□ 1.99
SNX25Q9H3E2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
SNX25Q9H3E2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SNX25Q9H3E2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.45■■□□□ 1.98
SNX25Q9H3E2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SNX25Q9H3E2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNX25Q9H3E2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNX25Q9H3E2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.44■■□□□ 1.98
SNX25Q9H3E2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.44■■□□□ 1.98
SNX25Q9H3E2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNX25Q9H3E2 AP004833.2-201ENST00000532228 1454 ntBASIC27.44■■□□□ 1.98
SNX25Q9H3E2 AL139393.2-201ENST00000608721 2025 ntBASIC27.43■■□□□ 1.98
SNX25Q9H3E2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNX25Q9H3E2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNX25Q9H3E2 MIR3648-2-201ENST00000581792 180 ntBASIC27.43■■□□□ 1.98
SNX25Q9H3E2 MIR3648-1-201ENST00000615959 180 ntBASIC27.43■■□□□ 1.98
SNX25Q9H3E2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNX25Q9H3E2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
SNX25Q9H3E2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SNX25Q9H3E2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
SNX25Q9H3E2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNX25Q9H3E2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SNX25Q9H3E2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
SNX25Q9H3E2 HLA-V-202ENST00000446817 847 ntBASIC27.41■■□□□ 1.98
SNX25Q9H3E2 CR559946.2-201ENST00000623684 991 ntBASIC27.41■■□□□ 1.98
SNX25Q9H3E2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.41■■□□□ 1.98
SNX25Q9H3E2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
SNX25Q9H3E2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
SNX25Q9H3E2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNX25Q9H3E2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SNX25Q9H3E2 AC016575.1-201ENST00000607026 382 ntBASIC27.4■■□□□ 1.98
SNX25Q9H3E2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
SNX25Q9H3E2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SNX25Q9H3E2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.38■■□□□ 1.97
SNX25Q9H3E2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNX25Q9H3E2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SNX25Q9H3E2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.37■■□□□ 1.97
SNX25Q9H3E2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.36■■□□□ 1.97
SNX25Q9H3E2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.36■■□□□ 1.97
SNX25Q9H3E2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
SNX25Q9H3E2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNX25Q9H3E2 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.35■■□□□ 1.97
SNX25Q9H3E2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SNX25Q9H3E2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.34■■□□□ 1.97
SNX25Q9H3E2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
SNX25Q9H3E2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.34■■□□□ 1.97
SNX25Q9H3E2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SNX25Q9H3E2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
SNX25Q9H3E2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.33■■□□□ 1.97
SNX25Q9H3E2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.33■■□□□ 1.97
SNX25Q9H3E2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
SNX25Q9H3E2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.33■■□□□ 1.97
SNX25Q9H3E2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.32■■□□□ 1.96
SNX25Q9H3E2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.32■■□□□ 1.96
SNX25Q9H3E2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC27.32■■□□□ 1.96
SNX25Q9H3E2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.32■■□□□ 1.96
SNX25Q9H3E2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SNX25Q9H3E2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.31■■□□□ 1.96
SNX25Q9H3E2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.31■■□□□ 1.96
SNX25Q9H3E2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNX25Q9H3E2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SNX25Q9H3E2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNX25Q9H3E2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SNX25Q9H3E2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SNX25Q9H3E2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNX25Q9H3E2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SNX25Q9H3E2 MIR639-201ENST00000384974 98 ntBASIC27.28■■□□□ 1.96
SNX25Q9H3E2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.28■■□□□ 1.96
SNX25Q9H3E2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
SNX25Q9H3E2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.27■■□□□ 1.96
SNX25Q9H3E2 AC110285.7-201ENST00000624417 1536 ntBASIC27.27■■□□□ 1.96
SNX25Q9H3E2 AC100797.4-201ENST00000631653 1827 ntBASIC27.26■■□□□ 1.95
SNX25Q9H3E2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SNX25Q9H3E2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SNX25Q9H3E2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.26■■□□□ 1.95
SNX25Q9H3E2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.25■■□□□ 1.95
SNX25Q9H3E2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SNX25Q9H3E2 ABCB10P3-201ENST00000561950 2166 ntBASIC27.24■■□□□ 1.95
SNX25Q9H3E2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNX25Q9H3E2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SNX25Q9H3E2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNX25Q9H3E2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNX25Q9H3E2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
SNX25Q9H3E2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.21■■□□□ 1.95
SNX25Q9H3E2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
SNX25Q9H3E2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SNX25Q9H3E2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.21■■□□□ 1.95
SNX25Q9H3E2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms