Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
TRIM11Q96F44 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.14■■□□□ 1.93
TRIM11Q96F44 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM11Q96F44 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.13■■□□□ 1.93
TRIM11Q96F44 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM11Q96F44 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM11Q96F44 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM11Q96F44 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM11Q96F44 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
TRIM11Q96F44 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.12■■□□□ 1.93
TRIM11Q96F44 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM11Q96F44 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.11■■□□□ 1.93
TRIM11Q96F44 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM11Q96F44 MIR6090-201ENST00000622481 60 ntBASIC27.11■■□□□ 1.93
TRIM11Q96F44 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM11Q96F44 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM11Q96F44 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRIM11Q96F44 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM11Q96F44 AC100797.4-201ENST00000631653 1827 ntBASIC27.09■■□□□ 1.93
TRIM11Q96F44 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM11Q96F44 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM11Q96F44 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM11Q96F44 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
TRIM11Q96F44 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM11Q96F44 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM11Q96F44 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.08■■□□□ 1.93
TRIM11Q96F44 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.07■■□□□ 1.92
TRIM11Q96F44 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM11Q96F44 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.07■■□□□ 1.92
TRIM11Q96F44 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM11Q96F44 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM11Q96F44 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.06■■□□□ 1.92
TRIM11Q96F44 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM11Q96F44 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.05■■□□□ 1.92
TRIM11Q96F44 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM11Q96F44 AC135983.2-203ENST00000454486 1613 ntBASIC27.05■■□□□ 1.92
TRIM11Q96F44 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM11Q96F44 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC27.04■■□□□ 1.92
TRIM11Q96F44 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
TRIM11Q96F44 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM11Q96F44 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM11Q96F44 BX255925.1-201ENST00000566954 1854 ntBASIC27.04■■□□□ 1.92
TRIM11Q96F44 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TRIM11Q96F44 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TRIM11Q96F44 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.03■■□□□ 1.92
TRIM11Q96F44 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TRIM11Q96F44 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.02■■□□□ 1.92
TRIM11Q96F44 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
TRIM11Q96F44 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM11Q96F44 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRIM11Q96F44 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.02■■□□□ 1.92
TRIM11Q96F44 LINC00273-201ENST00000539813 1452 ntBASIC27.01■■□□□ 1.91
TRIM11Q96F44 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.01■■□□□ 1.91
TRIM11Q96F44 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TRIM11Q96F44 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27■■□□□ 1.91
TRIM11Q96F44 AC087741.3-201ENST00000624270 1347 ntBASIC27■■□□□ 1.91
TRIM11Q96F44 AP002414.2-202ENST00000590929 1450 ntBASIC27■■□□□ 1.91
TRIM11Q96F44 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM11Q96F44 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.99■■□□□ 1.91
TRIM11Q96F44 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM11Q96F44 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.99■■□□□ 1.91
TRIM11Q96F44 AL162393.1-201ENST00000437852 946 ntBASIC26.98■■□□□ 1.91
TRIM11Q96F44 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.98■■□□□ 1.91
TRIM11Q96F44 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRIM11Q96F44 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRIM11Q96F44 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
TRIM11Q96F44 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM11Q96F44 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM11Q96F44 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
TRIM11Q96F44 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM11Q96F44 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TRIM11Q96F44 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM11Q96F44 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM11Q96F44 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM11Q96F44 WHAMMP2-203ENST00000563942 1603 ntBASIC26.96■■□□□ 1.91
TRIM11Q96F44 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TRIM11Q96F44 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.96■■□□□ 1.91
TRIM11Q96F44 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
TRIM11Q96F44 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.95■■□□□ 1.9
TRIM11Q96F44 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.95■■□□□ 1.9
TRIM11Q96F44 AC044849.2-201ENST00000606596 710 ntBASIC26.94■■□□□ 1.9
TRIM11Q96F44 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
TRIM11Q96F44 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM11Q96F44 LINC01003-201ENST00000564834 1764 ntBASIC26.94■■□□□ 1.9
TRIM11Q96F44 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM11Q96F44 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM11Q96F44 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.93■■□□□ 1.9
TRIM11Q96F44 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM11Q96F44 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM11Q96F44 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.92■■□□□ 1.9
TRIM11Q96F44 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM11Q96F44 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRIM11Q96F44 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.91■■□□□ 1.9
TRIM11Q96F44 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.91■■□□□ 1.9
TRIM11Q96F44 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
TRIM11Q96F44 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM11Q96F44 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM11Q96F44 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM11Q96F44 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM11Q96F44 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms