Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 AC093323.1-202ENST00000635031 2045 ntBASIC21.33■■□□□ 1
SCARB1Q8WTV0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SCARB1Q8WTV0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
SCARB1Q8WTV0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SCARB1Q8WTV0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.31■■□□□ 1
SCARB1Q8WTV0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.31■■□□□ 1
SCARB1Q8WTV0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.31■■□□□ 1
SCARB1Q8WTV0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.31■■□□□ 1
SCARB1Q8WTV0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.31■■□□□ 1
SCARB1Q8WTV0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.3■■□□□ 1
SCARB1Q8WTV0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
SCARB1Q8WTV0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.29■■□□□ 1
SCARB1Q8WTV0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SCARB1Q8WTV0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SCARB1Q8WTV0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.29■■□□□ 1
SCARB1Q8WTV0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SCARB1Q8WTV0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SCARB1Q8WTV0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCARB1Q8WTV0 BX255925.1-201ENST00000566954 1854 ntBASIC21.28■■□□□ 1
SCARB1Q8WTV0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SCARB1Q8WTV0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCARB1Q8WTV0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
SCARB1Q8WTV0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.27■■□□□ 1
SCARB1Q8WTV0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCARB1Q8WTV0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SCARB1Q8WTV0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SCARB1Q8WTV0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SCARB1Q8WTV0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SCARB1Q8WTV0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SCARB1Q8WTV0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.25■□□□□ 0.99
SCARB1Q8WTV0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SCARB1Q8WTV0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCARB1Q8WTV0 AC020928.2-201ENST00000588717 2197 ntBASIC21.23■□□□□ 0.99
SCARB1Q8WTV0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SCARB1Q8WTV0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SCARB1Q8WTV0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SCARB1Q8WTV0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SCARB1Q8WTV0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SCARB1Q8WTV0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCARB1Q8WTV0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCARB1Q8WTV0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCARB1Q8WTV0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCARB1Q8WTV0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCARB1Q8WTV0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCARB1Q8WTV0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCARB1Q8WTV0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCARB1Q8WTV0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCARB1Q8WTV0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCARB1Q8WTV0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCARB1Q8WTV0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SCARB1Q8WTV0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 AC091060.1-201ENST00000623524 1766 ntBASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SCARB1Q8WTV0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.13■□□□□ 0.97
SCARB1Q8WTV0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCARB1Q8WTV0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCARB1Q8WTV0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SCARB1Q8WTV0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCARB1Q8WTV0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SCARB1Q8WTV0 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SCARB1Q8WTV0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
SCARB1Q8WTV0 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SCARB1Q8WTV0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms