Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTSSBQ8NFR3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC14.23□□□□□ -0.13
SPTSSBQ8NFR3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSBQ8NFR3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
SPTSSBQ8NFR3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SPTSSBQ8NFR3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SPTSSBQ8NFR3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SPTSSBQ8NFR3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SPTSSBQ8NFR3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SPTSSBQ8NFR3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SPTSSBQ8NFR3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSBQ8NFR3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPTSSBQ8NFR3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSBQ8NFR3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPTSSBQ8NFR3 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPTSSBQ8NFR3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPTSSBQ8NFR3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPTSSBQ8NFR3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPTSSBQ8NFR3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPTSSBQ8NFR3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPTSSBQ8NFR3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSBQ8NFR3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSBQ8NFR3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPTSSBQ8NFR3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSBQ8NFR3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSBQ8NFR3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SPTSSBQ8NFR3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SPTSSBQ8NFR3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SPTSSBQ8NFR3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTSSBQ8NFR3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSBQ8NFR3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSBQ8NFR3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTSSBQ8NFR3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SPTSSBQ8NFR3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTSSBQ8NFR3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms