Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC71LQ8N9Z2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC71LQ8N9Z2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71LQ8N9Z2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71LQ8N9Z2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71LQ8N9Z2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 LINC01003-201ENST00000564834 1764 ntBASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71LQ8N9Z2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC71LQ8N9Z2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71LQ8N9Z2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71LQ8N9Z2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.16■□□□□ 0.98
CCDC71LQ8N9Z2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71LQ8N9Z2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC71LQ8N9Z2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC71LQ8N9Z2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC71LQ8N9Z2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC71LQ8N9Z2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC71LQ8N9Z2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC71LQ8N9Z2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC71LQ8N9Z2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC71LQ8N9Z2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC71LQ8N9Z2 AC127502.1-201ENST00000399971 1502 ntBASIC21.08■□□□□ 0.96
CCDC71LQ8N9Z2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC71LQ8N9Z2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC71LQ8N9Z2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC71LQ8N9Z2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC71LQ8N9Z2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC71LQ8N9Z2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms