Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.61■■■□□ 2.17
DHX40Q8IX18 LINC01003-201ENST00000564834 1764 ntBASIC28.6■■■□□ 2.17
DHX40Q8IX18 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
DHX40Q8IX18 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DHX40Q8IX18 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DHX40Q8IX18 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
DHX40Q8IX18 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.59■■■□□ 2.17
DHX40Q8IX18 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
DHX40Q8IX18 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
DHX40Q8IX18 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
DHX40Q8IX18 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
DHX40Q8IX18 SETD8P1-201ENST00000623146 1180 ntBASIC28.58■■■□□ 2.17
DHX40Q8IX18 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
DHX40Q8IX18 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
DHX40Q8IX18 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.57■■■□□ 2.16
DHX40Q8IX18 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DHX40Q8IX18 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
DHX40Q8IX18 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
DHX40Q8IX18 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DHX40Q8IX18 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DHX40Q8IX18 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
DHX40Q8IX18 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.56■■■□□ 2.16
DHX40Q8IX18 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
DHX40Q8IX18 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.56■■■□□ 2.16
DHX40Q8IX18 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DHX40Q8IX18 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DHX40Q8IX18 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.54■■■□□ 2.16
DHX40Q8IX18 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
DHX40Q8IX18 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
DHX40Q8IX18 AC097358.2-201ENST00000607541 1159 ntBASIC28.53■■■□□ 2.16
DHX40Q8IX18 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
DHX40Q8IX18 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DHX40Q8IX18 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.53■■■□□ 2.16
DHX40Q8IX18 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.53■■■□□ 2.16
DHX40Q8IX18 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
DHX40Q8IX18 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC28.53■■■□□ 2.16
DHX40Q8IX18 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
DHX40Q8IX18 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.52■■■□□ 2.16
DHX40Q8IX18 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
DHX40Q8IX18 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.52■■■□□ 2.16
DHX40Q8IX18 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
DHX40Q8IX18 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
DHX40Q8IX18 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.51■■■□□ 2.15
DHX40Q8IX18 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
DHX40Q8IX18 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
DHX40Q8IX18 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
DHX40Q8IX18 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
DHX40Q8IX18 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.5■■■□□ 2.15
DHX40Q8IX18 AC100797.4-201ENST00000631653 1827 ntBASIC28.49■■■□□ 2.15
DHX40Q8IX18 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DHX40Q8IX18 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
DHX40Q8IX18 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
DHX40Q8IX18 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.48■■■□□ 2.15
DHX40Q8IX18 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.48■■■□□ 2.15
DHX40Q8IX18 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
DHX40Q8IX18 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
DHX40Q8IX18 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
DHX40Q8IX18 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
DHX40Q8IX18 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
DHX40Q8IX18 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.46■■■□□ 2.15
DHX40Q8IX18 AC136428.2-201ENST00000563187 214 ntBASIC28.46■■■□□ 2.15
DHX40Q8IX18 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.45■■■□□ 2.14
DHX40Q8IX18 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
DHX40Q8IX18 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
DHX40Q8IX18 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.44■■■□□ 2.14
DHX40Q8IX18 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
DHX40Q8IX18 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC28.43■■■□□ 2.14
DHX40Q8IX18 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC28.43■■■□□ 2.14
DHX40Q8IX18 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
DHX40Q8IX18 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
DHX40Q8IX18 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
DHX40Q8IX18 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
DHX40Q8IX18 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
DHX40Q8IX18 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
DHX40Q8IX18 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DHX40Q8IX18 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
DHX40Q8IX18 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
DHX40Q8IX18 AC135731.1-201ENST00000569415 2548 ntBASIC28.39■■■□□ 2.14
DHX40Q8IX18 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.39■■■□□ 2.14
DHX40Q8IX18 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
DHX40Q8IX18 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
DHX40Q8IX18 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.38■■■□□ 2.13
DHX40Q8IX18 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
DHX40Q8IX18 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
DHX40Q8IX18 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.37■■■□□ 2.13
DHX40Q8IX18 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
DHX40Q8IX18 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.37■■■□□ 2.13
DHX40Q8IX18 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
DHX40Q8IX18 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.36■■■□□ 2.13
DHX40Q8IX18 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
DHX40Q8IX18 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.35■■■□□ 2.13
DHX40Q8IX18 AL391121.1-201ENST00000607967 1349 ntBASIC28.35■■■□□ 2.13
DHX40Q8IX18 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
DHX40Q8IX18 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
DHX40Q8IX18 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.34■■■□□ 2.13
DHX40Q8IX18 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.34■■■□□ 2.13
DHX40Q8IX18 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
DHX40Q8IX18 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
DHX40Q8IX18 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.33■■■□□ 2.13
DHX40Q8IX18 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms