Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
SYVN1Q86TM6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.2■■□□□ 1.62
SYVN1Q86TM6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SYVN1Q86TM6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
SYVN1Q86TM6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.19■■□□□ 1.62
SYVN1Q86TM6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
SYVN1Q86TM6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYVN1Q86TM6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYVN1Q86TM6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
SYVN1Q86TM6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SYVN1Q86TM6 AC108673.1-201ENST00000510422 1159 ntBASIC25.16■■□□□ 1.62
SYVN1Q86TM6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.15■■□□□ 1.62
SYVN1Q86TM6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SYVN1Q86TM6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.15■■□□□ 1.62
SYVN1Q86TM6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SYVN1Q86TM6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYVN1Q86TM6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYVN1Q86TM6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYVN1Q86TM6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.14■■□□□ 1.62
SYVN1Q86TM6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SYVN1Q86TM6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SYVN1Q86TM6 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SYVN1Q86TM6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
SYVN1Q86TM6 AC127502.1-201ENST00000399971 1502 ntBASIC25.13■■□□□ 1.61
SYVN1Q86TM6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SYVN1Q86TM6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYVN1Q86TM6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYVN1Q86TM6 AC021231.2-201ENST00000594613 730 ntBASIC25.12■■□□□ 1.61
SYVN1Q86TM6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYVN1Q86TM6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SYVN1Q86TM6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SYVN1Q86TM6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
SYVN1Q86TM6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYVN1Q86TM6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.11■■□□□ 1.61
SYVN1Q86TM6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYVN1Q86TM6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SYVN1Q86TM6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SYVN1Q86TM6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.1■■□□□ 1.61
SYVN1Q86TM6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SYVN1Q86TM6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SYVN1Q86TM6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.09■■□□□ 1.61
SYVN1Q86TM6 AP004833.2-201ENST00000532228 1454 ntBASIC25.09■■□□□ 1.61
SYVN1Q86TM6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.08■■□□□ 1.61
SYVN1Q86TM6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SYVN1Q86TM6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SYVN1Q86TM6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.07■■□□□ 1.6
SYVN1Q86TM6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.07■■□□□ 1.6
SYVN1Q86TM6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.07■■□□□ 1.6
SYVN1Q86TM6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYVN1Q86TM6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.06■■□□□ 1.6
SYVN1Q86TM6 MIR6090-201ENST00000622481 60 ntBASIC25.06■■□□□ 1.6
SYVN1Q86TM6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.06■■□□□ 1.6
SYVN1Q86TM6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SYVN1Q86TM6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.05■■□□□ 1.6
SYVN1Q86TM6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SYVN1Q86TM6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SYVN1Q86TM6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SYVN1Q86TM6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SYVN1Q86TM6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SYVN1Q86TM6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SYVN1Q86TM6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.03■■□□□ 1.6
SYVN1Q86TM6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SYVN1Q86TM6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.03■■□□□ 1.6
SYVN1Q86TM6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SYVN1Q86TM6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SYVN1Q86TM6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SYVN1Q86TM6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25■■□□□ 1.59
SYVN1Q86TM6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.99■■□□□ 1.59
SYVN1Q86TM6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SYVN1Q86TM6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.98■■□□□ 1.59
SYVN1Q86TM6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SYVN1Q86TM6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYVN1Q86TM6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYVN1Q86TM6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYVN1Q86TM6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYVN1Q86TM6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
SYVN1Q86TM6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SYVN1Q86TM6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
SYVN1Q86TM6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
SYVN1Q86TM6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SYVN1Q86TM6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYVN1Q86TM6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYVN1Q86TM6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYVN1Q86TM6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SYVN1Q86TM6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
SYVN1Q86TM6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SYVN1Q86TM6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SYVN1Q86TM6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms