Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC13.67□□□□□ -0.22
LCA10Q71F78 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LCA10Q71F78 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC13.67□□□□□ -0.22
LCA10Q71F78 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.66□□□□□ -0.22
LCA10Q71F78 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LCA10Q71F78 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
LCA10Q71F78 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC13.66□□□□□ -0.22
LCA10Q71F78 AL449106.1-201ENST00000608517 1980 ntBASIC13.66□□□□□ -0.22
LCA10Q71F78 AC133561.1-201ENST00000568600 2415 ntBASIC13.66□□□□□ -0.22
LCA10Q71F78 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC13.66□□□□□ -0.22
LCA10Q71F78 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.66□□□□□ -0.22
LCA10Q71F78 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC13.65□□□□□ -0.22
LCA10Q71F78 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LCA10Q71F78 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LCA10Q71F78 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCA10Q71F78 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LCA10Q71F78 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LCA10Q71F78 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC13.64□□□□□ -0.23
LCA10Q71F78 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LCA10Q71F78 AC120057.4-201ENST00000624722 1615 ntBASIC13.64□□□□□ -0.23
LCA10Q71F78 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
LCA10Q71F78 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.63□□□□□ -0.23
LCA10Q71F78 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LCA10Q71F78 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LCA10Q71F78 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LCA10Q71F78 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LCA10Q71F78 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LCA10Q71F78 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LCA10Q71F78 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC13.61□□□□□ -0.23
LCA10Q71F78 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LCA10Q71F78 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LCA10Q71F78 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.6□□□□□ -0.23
LCA10Q71F78 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LCA10Q71F78 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC13.6□□□□□ -0.23
LCA10Q71F78 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC13.6□□□□□ -0.23
LCA10Q71F78 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LCA10Q71F78 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC13.59□□□□□ -0.23
LCA10Q71F78 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCA10Q71F78 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCA10Q71F78 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LCA10Q71F78 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LCA10Q71F78 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LCA10Q71F78 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCA10Q71F78 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC13.58□□□□□ -0.23
LCA10Q71F78 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCA10Q71F78 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
LCA10Q71F78 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
LCA10Q71F78 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCA10Q71F78 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC13.58□□□□□ -0.24
LCA10Q71F78 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LCA10Q71F78 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LCA10Q71F78 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
LCA10Q71F78 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LCA10Q71F78 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCA10Q71F78 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC13.57□□□□□ -0.24
LCA10Q71F78 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCA10Q71F78 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCA10Q71F78 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LCA10Q71F78 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LCA10Q71F78 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC13.56□□□□□ -0.24
LCA10Q71F78 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LCA10Q71F78 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCA10Q71F78 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCA10Q71F78 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCA10Q71F78 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LCA10Q71F78 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LCA10Q71F78 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms