Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.49■□□□□ 0.71
CDPF1Q6NVV7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CDPF1Q6NVV7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDPF1Q6NVV7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CDPF1Q6NVV7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDPF1Q6NVV7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDPF1Q6NVV7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDPF1Q6NVV7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CDPF1Q6NVV7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDPF1Q6NVV7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDPF1Q6NVV7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDPF1Q6NVV7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDPF1Q6NVV7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.39■□□□□ 0.69
CDPF1Q6NVV7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDPF1Q6NVV7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.37■□□□□ 0.69
CDPF1Q6NVV7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDPF1Q6NVV7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDPF1Q6NVV7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.34■□□□□ 0.69
CDPF1Q6NVV7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDPF1Q6NVV7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDPF1Q6NVV7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDPF1Q6NVV7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDPF1Q6NVV7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDPF1Q6NVV7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 LINC00543-201ENST00000567234 1845 ntBASIC19.3■□□□□ 0.68
CDPF1Q6NVV7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
CDPF1Q6NVV7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.28■□□□□ 0.68
CDPF1Q6NVV7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms