Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.17■■■□□ 2.9
RC3H1Q5TC82 AC135983.2-203ENST00000454486 1613 ntBASIC33.17■■■□□ 2.9
RC3H1Q5TC82 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
RC3H1Q5TC82 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
RC3H1Q5TC82 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.15■■■□□ 2.9
RC3H1Q5TC82 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
RC3H1Q5TC82 WHAMMP2-203ENST00000563942 1603 ntBASIC33.13■■■□□ 2.89
RC3H1Q5TC82 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
RC3H1Q5TC82 AC127502.1-201ENST00000399971 1502 ntBASIC33.12■■■□□ 2.89
RC3H1Q5TC82 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
RC3H1Q5TC82 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
RC3H1Q5TC82 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.11■■■□□ 2.89
RC3H1Q5TC82 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.1■■■□□ 2.89
RC3H1Q5TC82 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RC3H1Q5TC82 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
RC3H1Q5TC82 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
RC3H1Q5TC82 AC148477.6-201ENST00000623746 465 ntBASIC33.08■■■□□ 2.89
RC3H1Q5TC82 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.07■■■□□ 2.88
RC3H1Q5TC82 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RC3H1Q5TC82 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC33.07■■■□□ 2.88
RC3H1Q5TC82 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
RC3H1Q5TC82 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RC3H1Q5TC82 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RC3H1Q5TC82 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RC3H1Q5TC82 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
RC3H1Q5TC82 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC33.05■■■□□ 2.88
RC3H1Q5TC82 AC060814.1-201ENST00000554326 538 ntBASIC33.05■■■□□ 2.88
RC3H1Q5TC82 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.05■■■□□ 2.88
RC3H1Q5TC82 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
RC3H1Q5TC82 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.04■■■□□ 2.88
RC3H1Q5TC82 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
RC3H1Q5TC82 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
RC3H1Q5TC82 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
RC3H1Q5TC82 U85056.1-201ENST00000616429 682 ntBASIC33.03■■■□□ 2.88
RC3H1Q5TC82 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC33.03■■■□□ 2.88
RC3H1Q5TC82 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
RC3H1Q5TC82 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
RC3H1Q5TC82 AC018358.1-201ENST00000631079 1402 ntBASIC33.01■■■□□ 2.87
RC3H1Q5TC82 AC110285.7-201ENST00000624417 1536 ntBASIC32.99■■■□□ 2.87
RC3H1Q5TC82 AL033527.3-201ENST00000566366 1196 ntBASIC32.99■■■□□ 2.87
RC3H1Q5TC82 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RC3H1Q5TC82 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.98■■■□□ 2.87
RC3H1Q5TC82 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.98■■■□□ 2.87
RC3H1Q5TC82 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.97■■■□□ 2.87
RC3H1Q5TC82 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
RC3H1Q5TC82 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.95■■■□□ 2.87
RC3H1Q5TC82 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.95■■■□□ 2.87
RC3H1Q5TC82 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
RC3H1Q5TC82 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.95■■■□□ 2.86
RC3H1Q5TC82 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
RC3H1Q5TC82 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
RC3H1Q5TC82 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
RC3H1Q5TC82 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RC3H1Q5TC82 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.93■■■□□ 2.86
RC3H1Q5TC82 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RC3H1Q5TC82 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RC3H1Q5TC82 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
RC3H1Q5TC82 AC092296.2-201ENST00000589470 999 ntBASIC32.91■■■□□ 2.86
RC3H1Q5TC82 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
RC3H1Q5TC82 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RC3H1Q5TC82 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RC3H1Q5TC82 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
RC3H1Q5TC82 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.89■■■□□ 2.86
RC3H1Q5TC82 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
RC3H1Q5TC82 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.88■■■□□ 2.85
RC3H1Q5TC82 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RC3H1Q5TC82 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.88■■■□□ 2.85
RC3H1Q5TC82 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.87■■■□□ 2.85
RC3H1Q5TC82 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.87■■■□□ 2.85
RC3H1Q5TC82 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.87■■■□□ 2.85
RC3H1Q5TC82 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.87■■■□□ 2.85
RC3H1Q5TC82 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
RC3H1Q5TC82 MIR219A2-201ENST00000608502 1504 ntBASIC32.87■■■□□ 2.85
RC3H1Q5TC82 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RC3H1Q5TC82 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RC3H1Q5TC82 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RC3H1Q5TC82 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
RC3H1Q5TC82 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
RC3H1Q5TC82 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RC3H1Q5TC82 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RC3H1Q5TC82 KRT18P60-201ENST00000312876 1297 ntBASIC32.83■■■□□ 2.85
RC3H1Q5TC82 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RC3H1Q5TC82 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
RC3H1Q5TC82 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.83■■■□□ 2.85
RC3H1Q5TC82 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RC3H1Q5TC82 TSPY13P-201ENST00000338964 914 ntBASIC32.82■■■□□ 2.84
RC3H1Q5TC82 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RC3H1Q5TC82 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RC3H1Q5TC82 ECEL1P2-201ENST00000461596 1295 ntBASIC32.81■■■□□ 2.84
RC3H1Q5TC82 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RC3H1Q5TC82 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.8■■■□□ 2.84
RC3H1Q5TC82 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.79■■■□□ 2.84
RC3H1Q5TC82 AC004987.1-201ENST00000428627 508 ntBASIC32.79■■■□□ 2.84
RC3H1Q5TC82 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms