Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.99■■□□□ 1.27
LRRK2Q5S007 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRK2Q5S007 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LRRK2Q5S007 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.98■■□□□ 1.27
LRRK2Q5S007 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.98■■□□□ 1.27
LRRK2Q5S007 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.96■■□□□ 1.27
LRRK2Q5S007 AC148477.6-201ENST00000623746 465 ntBASIC22.96■■□□□ 1.27
LRRK2Q5S007 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.95■■□□□ 1.26
LRRK2Q5S007 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LRRK2Q5S007 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
LRRK2Q5S007 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LRRK2Q5S007 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LRRK2Q5S007 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LRRK2Q5S007 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRK2Q5S007 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.93■■□□□ 1.26
LRRK2Q5S007 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRK2Q5S007 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.93■■□□□ 1.26
LRRK2Q5S007 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
LRRK2Q5S007 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
LRRK2Q5S007 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LRRK2Q5S007 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
LRRK2Q5S007 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
LRRK2Q5S007 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
LRRK2Q5S007 AC009299.2-201ENST00000482477 511 ntBASIC22.91■■□□□ 1.26
LRRK2Q5S007 AC129492.7-201ENST00000622992 756 ntBASIC22.91■■□□□ 1.26
LRRK2Q5S007 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
LRRK2Q5S007 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
LRRK2Q5S007 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LRRK2Q5S007 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.9■■□□□ 1.26
LRRK2Q5S007 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.89■■□□□ 1.26
LRRK2Q5S007 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LRRK2Q5S007 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.89■■□□□ 1.25
LRRK2Q5S007 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
LRRK2Q5S007 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
LRRK2Q5S007 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
LRRK2Q5S007 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.88■■□□□ 1.25
LRRK2Q5S007 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
LRRK2Q5S007 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.87■■□□□ 1.25
LRRK2Q5S007 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LRRK2Q5S007 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.86■■□□□ 1.25
LRRK2Q5S007 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LRRK2Q5S007 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRK2Q5S007 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC22.86■■□□□ 1.25
LRRK2Q5S007 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LRRK2Q5S007 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRK2Q5S007 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRK2Q5S007 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
LRRK2Q5S007 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.84■■□□□ 1.25
LRRK2Q5S007 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
LRRK2Q5S007 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
LRRK2Q5S007 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LRRK2Q5S007 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRK2Q5S007 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LRRK2Q5S007 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.83■■□□□ 1.25
LRRK2Q5S007 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRK2Q5S007 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LRRK2Q5S007 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.82■■□□□ 1.24
LRRK2Q5S007 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.82■■□□□ 1.24
LRRK2Q5S007 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LRRK2Q5S007 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
LRRK2Q5S007 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LRRK2Q5S007 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
LRRK2Q5S007 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
LRRK2Q5S007 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.8■■□□□ 1.24
LRRK2Q5S007 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
LRRK2Q5S007 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
LRRK2Q5S007 AL356441.2-201ENST00000443009 864 ntBASIC22.79■■□□□ 1.24
LRRK2Q5S007 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LRRK2Q5S007 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
LRRK2Q5S007 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRK2Q5S007 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRK2Q5S007 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRK2Q5S007 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.78■■□□□ 1.24
LRRK2Q5S007 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
LRRK2Q5S007 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
LRRK2Q5S007 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
LRRK2Q5S007 GUSBP5-201ENST00000418136 578 ntBASIC22.77■■□□□ 1.24
LRRK2Q5S007 THA1P-201ENST00000590384 1145 ntBASIC22.77■■□□□ 1.24
LRRK2Q5S007 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.77■■□□□ 1.24
LRRK2Q5S007 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.76■■□□□ 1.23
LRRK2Q5S007 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
LRRK2Q5S007 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRRK2Q5S007 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.76■■□□□ 1.23
LRRK2Q5S007 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.76■■□□□ 1.23
LRRK2Q5S007 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LRRK2Q5S007 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
LRRK2Q5S007 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC22.75■■□□□ 1.23
LRRK2Q5S007 DUX4L18-201ENST00000553347 1267 ntBASIC22.75■■□□□ 1.23
LRRK2Q5S007 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRRK2Q5S007 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRK2Q5S007 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.74■■□□□ 1.23
LRRK2Q5S007 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.74■■□□□ 1.23
LRRK2Q5S007 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRK2Q5S007 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRRK2Q5S007 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRRK2Q5S007 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.73■■□□□ 1.23
LRRK2Q5S007 KRT8P33-201ENST00000508125 1423 ntBASIC22.73■■□□□ 1.23
LRRK2Q5S007 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRRK2Q5S007 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.72■■□□□ 1.23
LRRK2Q5S007 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms