Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HIST1H1AQ02539 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.35■□□□□ 0.69
HIST1H1AQ02539 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H1AQ02539 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HIST1H1AQ02539 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.35■□□□□ 0.69
HIST1H1AQ02539 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HIST1H1AQ02539 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HIST1H1AQ02539 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H1AQ02539 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.34■□□□□ 0.69
HIST1H1AQ02539 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HIST1H1AQ02539 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.33■□□□□ 0.69
HIST1H1AQ02539 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.33■□□□□ 0.68
HIST1H1AQ02539 AC127502.1-201ENST00000399971 1502 ntBASIC19.32■□□□□ 0.68
HIST1H1AQ02539 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST1H1AQ02539 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HIST1H1AQ02539 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.32■□□□□ 0.68
HIST1H1AQ02539 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HIST1H1AQ02539 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HIST1H1AQ02539 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1AQ02539 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1AQ02539 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1AQ02539 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HIST1H1AQ02539 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
HIST1H1AQ02539 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1AQ02539 SUZ12P1-203ENST00000578195 985 ntBASIC19.28■□□□□ 0.68
HIST1H1AQ02539 AC005559.1-201ENST00000589661 871 ntBASIC19.28■□□□□ 0.68
HIST1H1AQ02539 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HIST1H1AQ02539 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.28■□□□□ 0.68
HIST1H1AQ02539 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HIST1H1AQ02539 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.27■□□□□ 0.68
HIST1H1AQ02539 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HIST1H1AQ02539 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.27■□□□□ 0.68
HIST1H1AQ02539 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.27■□□□□ 0.67
HIST1H1AQ02539 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1AQ02539 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1AQ02539 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HIST1H1AQ02539 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HIST1H1AQ02539 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HIST1H1AQ02539 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 AP004833.2-201ENST00000532228 1454 ntBASIC19.25■□□□□ 0.67
HIST1H1AQ02539 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HIST1H1AQ02539 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HIST1H1AQ02539 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1AQ02539 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HIST1H1AQ02539 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.23■□□□□ 0.67
HIST1H1AQ02539 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 AL121749.1-202ENST00000609313 2153 ntBASIC19.22■□□□□ 0.67
HIST1H1AQ02539 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HIST1H1AQ02539 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HIST1H1AQ02539 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1AQ02539 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1AQ02539 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HIST1H1AQ02539 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.19■□□□□ 0.66
HIST1H1AQ02539 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIST1H1AQ02539 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms