Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.01■■□□□ 1.59
PDX1P52945 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDX1P52945 RARRES2P2-201ENST00000394842 485 ntBASIC25■■□□□ 1.59
PDX1P52945 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25■■□□□ 1.59
PDX1P52945 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25■■□□□ 1.59
PDX1P52945 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.99■■□□□ 1.59
PDX1P52945 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDX1P52945 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PDX1P52945 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PDX1P52945 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PDX1P52945 ABCB10P1-201ENST00000614297 2181 ntBASIC24.96■■□□□ 1.59
PDX1P52945 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
PDX1P52945 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.95■■□□□ 1.58
PDX1P52945 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
PDX1P52945 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
PDX1P52945 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
PDX1P52945 GPX1-201ENST00000419349 1106 ntBASIC24.94■■□□□ 1.58
PDX1P52945 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
PDX1P52945 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PDX1P52945 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PDX1P52945 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDX1P52945 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
PDX1P52945 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PDX1P52945 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
PDX1P52945 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDX1P52945 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PDX1P52945 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.9■■□□□ 1.58
PDX1P52945 ABHD17AP5-201ENST00000580133 923 ntBASIC24.89■■□□□ 1.58
PDX1P52945 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
PDX1P52945 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
PDX1P52945 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PDX1P52945 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.87■■□□□ 1.57
PDX1P52945 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
PDX1P52945 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
PDX1P52945 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.87■■□□□ 1.57
PDX1P52945 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.87■■□□□ 1.57
PDX1P52945 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDX1P52945 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PDX1P52945 AC127502.1-201ENST00000399971 1502 ntBASIC24.86■■□□□ 1.57
PDX1P52945 RNF126P1-201ENST00000567452 1320 ntBASIC24.86■■□□□ 1.57
PDX1P52945 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PDX1P52945 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PDX1P52945 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
PDX1P52945 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.84■■□□□ 1.57
PDX1P52945 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
PDX1P52945 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
PDX1P52945 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.83■■□□□ 1.57
PDX1P52945 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
PDX1P52945 WHAMMP2-203ENST00000563942 1603 ntBASIC24.83■■□□□ 1.56
PDX1P52945 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDX1P52945 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.81■■□□□ 1.56
PDX1P52945 AC135983.2-203ENST00000454486 1613 ntBASIC24.81■■□□□ 1.56
PDX1P52945 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PDX1P52945 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PDX1P52945 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.8■■□□□ 1.56
PDX1P52945 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PDX1P52945 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.79■■□□□ 1.56
PDX1P52945 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.79■■□□□ 1.56
PDX1P52945 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PDX1P52945 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PDX1P52945 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.78■■□□□ 1.56
PDX1P52945 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.78■■□□□ 1.56
PDX1P52945 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.77■■□□□ 1.56
PDX1P52945 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.77■■□□□ 1.56
PDX1P52945 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDX1P52945 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PDX1P52945 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDX1P52945 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PDX1P52945 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
PDX1P52945 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDX1P52945 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PDX1P52945 AC008813.1-201ENST00000536597 885 ntBASIC24.75■■□□□ 1.55
PDX1P52945 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PDX1P52945 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PDX1P52945 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PDX1P52945 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.74■■□□□ 1.55
PDX1P52945 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
PDX1P52945 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDX1P52945 AC022413.1-201ENST00000624602 984 ntBASIC24.73■■□□□ 1.55
PDX1P52945 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PDX1P52945 ST7-AS1-201ENST00000456775 1889 ntBASIC24.72■■□□□ 1.55
PDX1P52945 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PDX1P52945 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.71■■□□□ 1.55
PDX1P52945 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PDX1P52945 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms