Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.4■■■□□ 2.3
CLK2P49760 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CLK2P49760 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC29.4■■■□□ 2.3
CLK2P49760 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
CLK2P49760 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CLK2P49760 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.39■■■□□ 2.3
CLK2P49760 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L13-201ENST00000554103 1267 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L15-201ENST00000611059 1267 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L23-201ENST00000615195 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L24-201ENST00000617576 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L22-201ENST00000618238 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L20-201ENST00000619712 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L21-201ENST00000622058 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L10-201ENST00000622460 1267 ntBASIC29.39■■■□□ 2.3
CLK2P49760 DUX4L25-201ENST00000624915 1269 ntBASIC29.39■■■□□ 2.3
CLK2P49760 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.39■■■□□ 2.29
CLK2P49760 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CLK2P49760 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
CLK2P49760 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.38■■■□□ 2.29
CLK2P49760 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CLK2P49760 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.37■■■□□ 2.29
CLK2P49760 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.37■■■□□ 2.29
CLK2P49760 ABCB10P3-201ENST00000561950 2166 ntBASIC29.37■■■□□ 2.29
CLK2P49760 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.37■■■□□ 2.29
CLK2P49760 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.36■■■□□ 2.29
CLK2P49760 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CLK2P49760 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.36■■■□□ 2.29
CLK2P49760 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.36■■■□□ 2.29
CLK2P49760 CR559946.2-201ENST00000623684 991 ntBASIC29.36■■■□□ 2.29
CLK2P49760 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CLK2P49760 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.35■■■□□ 2.29
CLK2P49760 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.35■■■□□ 2.29
CLK2P49760 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLK2P49760 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLK2P49760 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.35■■■□□ 2.29
CLK2P49760 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.35■■■□□ 2.29
CLK2P49760 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
CLK2P49760 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CLK2P49760 MIR3648-2-201ENST00000581792 180 ntBASIC29.34■■■□□ 2.29
CLK2P49760 MIR3648-1-201ENST00000615959 180 ntBASIC29.34■■■□□ 2.29
CLK2P49760 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CLK2P49760 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.33■■■□□ 2.29
CLK2P49760 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CLK2P49760 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLK2P49760 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
CLK2P49760 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.32■■■□□ 2.28
CLK2P49760 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLK2P49760 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLK2P49760 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.31■■■□□ 2.28
CLK2P49760 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
CLK2P49760 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLK2P49760 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.3■■■□□ 2.28
CLK2P49760 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.3■■■□□ 2.28
CLK2P49760 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLK2P49760 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.3■■■□□ 2.28
CLK2P49760 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CLK2P49760 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLK2P49760 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CLK2P49760 AC139426.1-201ENST00000568218 2529 ntBASIC29.29■■■□□ 2.28
CLK2P49760 AC100797.4-201ENST00000631653 1827 ntBASIC29.29■■■□□ 2.28
CLK2P49760 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.28■■■□□ 2.28
CLK2P49760 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.28■■■□□ 2.28
CLK2P49760 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC29.28■■■□□ 2.28
CLK2P49760 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.27■■■□□ 2.28
CLK2P49760 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CLK2P49760 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.27■■■□□ 2.28
CLK2P49760 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLK2P49760 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CLK2P49760 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CLK2P49760 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
CLK2P49760 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.26■■■□□ 2.27
CLK2P49760 AC016575.1-201ENST00000607026 382 ntBASIC29.26■■■□□ 2.27
CLK2P49760 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CLK2P49760 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
CLK2P49760 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.26■■■□□ 2.27
CLK2P49760 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
CLK2P49760 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.24■■■□□ 2.27
CLK2P49760 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CLK2P49760 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.23■■■□□ 2.27
CLK2P49760 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.23■■■□□ 2.27
CLK2P49760 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.22■■■□□ 2.27
CLK2P49760 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.22■■■□□ 2.27
CLK2P49760 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLK2P49760 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CLK2P49760 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.21■■■□□ 2.27
CLK2P49760 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.21■■■□□ 2.27
CLK2P49760 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CLK2P49760 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.2■■■□□ 2.26
CLK2P49760 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CLK2P49760 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CLK2P49760 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
CLK2P49760 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CLK2P49760 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CLK2P49760 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.18■■■□□ 2.26
CLK2P49760 AC110285.7-201ENST00000624417 1536 ntBASIC29.18■■■□□ 2.26
CLK2P49760 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.16■■■□□ 2.26
CLK2P49760 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CLK2P49760 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CLK2P49760 MIR639-201ENST00000384974 98 ntBASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms