Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CEACAM3P40198 AC135983.2-203ENST00000454486 1613 ntBASIC20.84■□□□□ 0.93
CEACAM3P40198 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CEACAM3P40198 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CEACAM3P40198 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CEACAM3P40198 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CEACAM3P40198 ZNRF2P2-203ENST00000454624 420 ntBASIC20.83■□□□□ 0.93
CEACAM3P40198 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CEACAM3P40198 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.83■□□□□ 0.92
CEACAM3P40198 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.83■□□□□ 0.92
CEACAM3P40198 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CEACAM3P40198 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEACAM3P40198 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEACAM3P40198 LINC01971-201ENST00000617888 1048 ntBASIC20.82■□□□□ 0.92
CEACAM3P40198 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEACAM3P40198 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CEACAM3P40198 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CEACAM3P40198 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CEACAM3P40198 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.81■□□□□ 0.92
CEACAM3P40198 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CEACAM3P40198 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEACAM3P40198 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CEACAM3P40198 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.8■□□□□ 0.92
CEACAM3P40198 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEACAM3P40198 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CEACAM3P40198 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CEACAM3P40198 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CEACAM3P40198 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.79■□□□□ 0.92
CEACAM3P40198 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.79■□□□□ 0.92
CEACAM3P40198 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.78■□□□□ 0.92
CEACAM3P40198 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.78■□□□□ 0.92
CEACAM3P40198 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.78■□□□□ 0.92
CEACAM3P40198 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
CEACAM3P40198 WHAMMP2-203ENST00000563942 1603 ntBASIC20.78■□□□□ 0.92
CEACAM3P40198 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CEACAM3P40198 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.77■□□□□ 0.92
CEACAM3P40198 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.76■□□□□ 0.91
CEACAM3P40198 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEACAM3P40198 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.76■□□□□ 0.91
CEACAM3P40198 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.76■□□□□ 0.91
CEACAM3P40198 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.76■□□□□ 0.91
CEACAM3P40198 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CEACAM3P40198 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CEACAM3P40198 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEACAM3P40198 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.74■□□□□ 0.91
CEACAM3P40198 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CEACAM3P40198 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.74■□□□□ 0.91
CEACAM3P40198 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CEACAM3P40198 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.74■□□□□ 0.91
CEACAM3P40198 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CEACAM3P40198 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CEACAM3P40198 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CEACAM3P40198 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CEACAM3P40198 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
CEACAM3P40198 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEACAM3P40198 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.72■□□□□ 0.91
CEACAM3P40198 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.72■□□□□ 0.91
CEACAM3P40198 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CEACAM3P40198 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.72■□□□□ 0.91
CEACAM3P40198 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CEACAM3P40198 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CEACAM3P40198 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.71■□□□□ 0.91
CEACAM3P40198 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.71■□□□□ 0.91
CEACAM3P40198 DUX4L11-201ENST00000611504 1267 ntBASIC20.71■□□□□ 0.91
CEACAM3P40198 DUX4L12-201ENST00000614593 1267 ntBASIC20.71■□□□□ 0.91
CEACAM3P40198 DUX4L14-201ENST00000621227 1267 ntBASIC20.71■□□□□ 0.91
CEACAM3P40198 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CEACAM3P40198 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CEACAM3P40198 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.7■□□□□ 0.9
CEACAM3P40198 AC139426.1-201ENST00000568218 2529 ntBASIC20.7■□□□□ 0.9
CEACAM3P40198 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEACAM3P40198 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEACAM3P40198 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEACAM3P40198 MIR7108-201ENST00000614319 87 ntBASIC20.69■□□□□ 0.9
CEACAM3P40198 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CEACAM3P40198 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CEACAM3P40198 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.68■□□□□ 0.9
CEACAM3P40198 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CEACAM3P40198 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CEACAM3P40198 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.68■□□□□ 0.9
CEACAM3P40198 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.68■□□□□ 0.9
CEACAM3P40198 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CEACAM3P40198 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CEACAM3P40198 AC100797.4-201ENST00000631653 1827 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L13-201ENST00000554103 1267 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L15-201ENST00000611059 1267 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L23-201ENST00000615195 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L24-201ENST00000617576 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L22-201ENST00000618238 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L20-201ENST00000619712 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L21-201ENST00000622058 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L10-201ENST00000622460 1267 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DUX4L25-201ENST00000624915 1269 ntBASIC20.67■□□□□ 0.9
CEACAM3P40198 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEACAM3P40198 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CEACAM3P40198 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CEACAM3P40198 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
CEACAM3P40198 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CEACAM3P40198 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.66■□□□□ 0.9
CEACAM3P40198 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms