Protein–RNA interactions for Protein: P35250

RFC2, Replication factor C subunit 2, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2P35250 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RFC2P35250 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RFC2P35250 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RFC2P35250 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.34■■■□□ 2.13
RFC2P35250 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RFC2P35250 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.33■■■□□ 2.13
RFC2P35250 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.33■■■□□ 2.13
RFC2P35250 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RFC2P35250 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
RFC2P35250 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RFC2P35250 AC135983.2-203ENST00000454486 1613 ntBASIC28.3■■■□□ 2.12
RFC2P35250 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
RFC2P35250 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RFC2P35250 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.29■■■□□ 2.12
RFC2P35250 AC148477.6-201ENST00000623746 465 ntBASIC28.29■■■□□ 2.12
RFC2P35250 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
RFC2P35250 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
RFC2P35250 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.27■■■□□ 2.12
RFC2P35250 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
RFC2P35250 WHAMMP2-203ENST00000563942 1603 ntBASIC28.26■■■□□ 2.11
RFC2P35250 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
RFC2P35250 AC127502.1-201ENST00000399971 1502 ntBASIC28.26■■■□□ 2.11
RFC2P35250 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.25■■■□□ 2.11
RFC2P35250 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RFC2P35250 AC060814.1-201ENST00000554326 538 ntBASIC28.25■■■□□ 2.11
RFC2P35250 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFC2P35250 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.23■■■□□ 2.11
RFC2P35250 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFC2P35250 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFC2P35250 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
RFC2P35250 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RFC2P35250 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFC2P35250 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFC2P35250 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
RFC2P35250 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RFC2P35250 AL033527.3-201ENST00000566366 1196 ntBASIC28.22■■■□□ 2.11
RFC2P35250 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
RFC2P35250 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RFC2P35250 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.21■■■□□ 2.11
RFC2P35250 AC018358.1-201ENST00000631079 1402 ntBASIC28.21■■■□□ 2.11
RFC2P35250 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
RFC2P35250 U85056.1-201ENST00000616429 682 ntBASIC28.21■■■□□ 2.11
RFC2P35250 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
RFC2P35250 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
RFC2P35250 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.2■■■□□ 2.11
RFC2P35250 AC110285.7-201ENST00000624417 1536 ntBASIC28.2■■■□□ 2.1
RFC2P35250 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFC2P35250 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
RFC2P35250 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
RFC2P35250 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
RFC2P35250 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.17■■■□□ 2.1
RFC2P35250 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
RFC2P35250 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
RFC2P35250 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
RFC2P35250 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.16■■■□□ 2.1
RFC2P35250 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
RFC2P35250 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RFC2P35250 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RFC2P35250 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RFC2P35250 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.14■■■□□ 2.1
RFC2P35250 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RFC2P35250 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
RFC2P35250 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFC2P35250 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.13■■■□□ 2.09
RFC2P35250 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
RFC2P35250 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.13■■■□□ 2.09
RFC2P35250 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
RFC2P35250 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RFC2P35250 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RFC2P35250 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.11■■■□□ 2.09
RFC2P35250 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.11■■■□□ 2.09
RFC2P35250 AC092296.2-201ENST00000589470 999 ntBASIC28.11■■■□□ 2.09
RFC2P35250 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.11■■■□□ 2.09
RFC2P35250 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.1■■■□□ 2.09
RFC2P35250 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
RFC2P35250 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RFC2P35250 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFC2P35250 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFC2P35250 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFC2P35250 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RFC2P35250 MIR219A2-201ENST00000608502 1504 ntBASIC28.08■■■□□ 2.09
RFC2P35250 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
RFC2P35250 TSPY13P-201ENST00000338964 914 ntBASIC28.08■■■□□ 2.09
RFC2P35250 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RFC2P35250 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RFC2P35250 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.07■■■□□ 2.08
RFC2P35250 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFC2P35250 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RFC2P35250 ECEL1P2-201ENST00000461596 1295 ntBASIC28.06■■■□□ 2.08
RFC2P35250 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.05■■■□□ 2.08
RFC2P35250 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.05■■■□□ 2.08
RFC2P35250 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
RFC2P35250 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFC2P35250 KRT18P60-201ENST00000312876 1297 ntBASIC28.04■■■□□ 2.08
RFC2P35250 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.04■■■□□ 2.08
RFC2P35250 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
RFC2P35250 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.03■■■□□ 2.08
RFC2P35250 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.03■■■□□ 2.08
RFC2P35250 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
RFC2P35250 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms