Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0CP27449 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ATP6V0CP27449 LINC01003-201ENST00000564834 1764 ntBASIC20.51■□□□□ 0.87
ATP6V0CP27449 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.51■□□□□ 0.87
ATP6V0CP27449 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ATP6V0CP27449 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
ATP6V0CP27449 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ATP6V0CP27449 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ATP6V0CP27449 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.48■□□□□ 0.87
ATP6V0CP27449 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V0CP27449 AC010864.1-201ENST00000609407 1511 ntBASIC20.47■□□□□ 0.87
ATP6V0CP27449 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATP6V0CP27449 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATP6V0CP27449 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATP6V0CP27449 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATP6V0CP27449 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.45■□□□□ 0.86
ATP6V0CP27449 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ATP6V0CP27449 AC091060.1-201ENST00000623524 1766 ntBASIC20.44■□□□□ 0.86
ATP6V0CP27449 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
ATP6V0CP27449 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.43■□□□□ 0.86
ATP6V0CP27449 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.43■□□□□ 0.86
ATP6V0CP27449 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ATP6V0CP27449 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.42■□□□□ 0.86
ATP6V0CP27449 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ATP6V0CP27449 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP6V0CP27449 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ATP6V0CP27449 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V0CP27449 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V0CP27449 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V0CP27449 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V0CP27449 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V0CP27449 AP004833.2-201ENST00000532228 1454 ntBASIC20.39■□□□□ 0.85
ATP6V0CP27449 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V0CP27449 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ATP6V0CP27449 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V0CP27449 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V0CP27449 AC020928.2-201ENST00000588717 2197 ntBASIC20.38■□□□□ 0.85
ATP6V0CP27449 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V0CP27449 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ATP6V0CP27449 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.37■□□□□ 0.85
ATP6V0CP27449 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AC006077.2-201ENST00000623591 457 ntBASIC20.36■□□□□ 0.85
ATP6V0CP27449 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ATP6V0CP27449 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.36■□□□□ 0.85
ATP6V0CP27449 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
ATP6V0CP27449 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V0CP27449 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
ATP6V0CP27449 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP6V0CP27449 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V0CP27449 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP6V0CP27449 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V0CP27449 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP6V0CP27449 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP6V0CP27449 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0CP27449 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP6V0CP27449 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0CP27449 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP6V0CP27449 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ATP6V0CP27449 WASH5P-204ENST00000632292 975 ntBASIC20.31■□□□□ 0.84
ATP6V0CP27449 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms