Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN4O14493 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.18■■□□□ 1.46
CLDN4O14493 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN4O14493 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.18■■□□□ 1.46
CLDN4O14493 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CLDN4O14493 ABCB10P3-201ENST00000561950 2166 ntBASIC24.18■■□□□ 1.46
CLDN4O14493 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN4O14493 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
CLDN4O14493 WHAMMP2-203ENST00000563942 1603 ntBASIC24.17■■□□□ 1.46
CLDN4O14493 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN4O14493 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN4O14493 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CLDN4O14493 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
CLDN4O14493 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CLDN4O14493 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.14■■□□□ 1.46
CLDN4O14493 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
CLDN4O14493 DUX4L11-201ENST00000611504 1267 ntBASIC24.14■■□□□ 1.45
CLDN4O14493 DUX4L12-201ENST00000614593 1267 ntBASIC24.14■■□□□ 1.45
CLDN4O14493 DUX4L14-201ENST00000621227 1267 ntBASIC24.14■■□□□ 1.45
CLDN4O14493 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.13■■□□□ 1.45
CLDN4O14493 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CLDN4O14493 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLDN4O14493 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLDN4O14493 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.12■■□□□ 1.45
CLDN4O14493 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.12■■□□□ 1.45
CLDN4O14493 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.12■■□□□ 1.45
CLDN4O14493 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.12■■□□□ 1.45
CLDN4O14493 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.12■■□□□ 1.45
CLDN4O14493 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CLDN4O14493 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.11■■□□□ 1.45
CLDN4O14493 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.11■■□□□ 1.45
CLDN4O14493 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CLDN4O14493 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.1■■□□□ 1.45
CLDN4O14493 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CLDN4O14493 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.1■■□□□ 1.45
CLDN4O14493 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CLDN4O14493 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.1■■□□□ 1.45
CLDN4O14493 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLDN4O14493 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.09■■□□□ 1.45
CLDN4O14493 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.09■■□□□ 1.45
CLDN4O14493 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.09■■□□□ 1.45
CLDN4O14493 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLDN4O14493 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L13-201ENST00000554103 1267 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L15-201ENST00000611059 1267 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L23-201ENST00000615195 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L24-201ENST00000617576 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L22-201ENST00000618238 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L20-201ENST00000619712 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L21-201ENST00000622058 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L10-201ENST00000622460 1267 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 DUX4L25-201ENST00000624915 1269 ntBASIC24.08■■□□□ 1.45
CLDN4O14493 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.08■■□□□ 1.45
CLDN4O14493 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.07■■□□□ 1.44
CLDN4O14493 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.07■■□□□ 1.44
CLDN4O14493 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CLDN4O14493 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.07■■□□□ 1.44
CLDN4O14493 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLDN4O14493 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CLDN4O14493 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.07■■□□□ 1.44
CLDN4O14493 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN4O14493 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN4O14493 AC139426.1-201ENST00000568218 2529 ntBASIC24.06■■□□□ 1.44
CLDN4O14493 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLDN4O14493 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
CLDN4O14493 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLDN4O14493 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLDN4O14493 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLDN4O14493 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
CLDN4O14493 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.04■■□□□ 1.44
CLDN4O14493 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.04■■□□□ 1.44
CLDN4O14493 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.04■■□□□ 1.44
CLDN4O14493 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLDN4O14493 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN4O14493 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLDN4O14493 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.03■■□□□ 1.44
CLDN4O14493 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.03■■□□□ 1.44
CLDN4O14493 AC100797.4-201ENST00000631653 1827 ntBASIC24.03■■□□□ 1.44
CLDN4O14493 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CLDN4O14493 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.02■■□□□ 1.44
CLDN4O14493 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN4O14493 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.01■■□□□ 1.43
CLDN4O14493 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN4O14493 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN4O14493 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLDN4O14493 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN4O14493 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24■■□□□ 1.43
CLDN4O14493 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN4O14493 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CLDN4O14493 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN4O14493 MIR3648-2-201ENST00000581792 180 ntBASIC23.99■■□□□ 1.43
CLDN4O14493 MIR3648-1-201ENST00000615959 180 ntBASIC23.99■■□□□ 1.43
CLDN4O14493 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.99■■□□□ 1.43
CLDN4O14493 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.99■■□□□ 1.43
CLDN4O14493 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN4O14493 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN4O14493 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN4O14493 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.98■■□□□ 1.43
CLDN4O14493 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.98■■□□□ 1.43
CLDN4O14493 AC110285.7-201ENST00000624417 1536 ntBASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms