Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SIRPB1O00241 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.6■■□□□ 1.05
SIRPB1O00241 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIRPB1O00241 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SIRPB1O00241 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.59■■□□□ 1.05
SIRPB1O00241 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SIRPB1O00241 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIRPB1O00241 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIRPB1O00241 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIRPB1O00241 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIRPB1O00241 AL162393.1-201ENST00000437852 946 ntBASIC21.56■■□□□ 1.04
SIRPB1O00241 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.56■■□□□ 1.04
SIRPB1O00241 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIRPB1O00241 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIRPB1O00241 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIRPB1O00241 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.55■■□□□ 1.04
SIRPB1O00241 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.55■■□□□ 1.04
SIRPB1O00241 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIRPB1O00241 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIRPB1O00241 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIRPB1O00241 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIRPB1O00241 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIRPB1O00241 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.53■■□□□ 1.04
SIRPB1O00241 AC100797.4-201ENST00000631653 1827 ntBASIC21.53■■□□□ 1.04
SIRPB1O00241 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIRPB1O00241 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SIRPB1O00241 AC087741.3-201ENST00000624270 1347 ntBASIC21.53■■□□□ 1.04
SIRPB1O00241 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.53■■□□□ 1.04
SIRPB1O00241 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIRPB1O00241 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIRPB1O00241 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIRPB1O00241 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.52■■□□□ 1.04
SIRPB1O00241 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.52■■□□□ 1.03
SIRPB1O00241 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SIRPB1O00241 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SIRPB1O00241 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIRPB1O00241 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.51■■□□□ 1.03
SIRPB1O00241 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.51■■□□□ 1.03
SIRPB1O00241 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIRPB1O00241 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIRPB1O00241 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIRPB1O00241 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIRPB1O00241 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIRPB1O00241 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIRPB1O00241 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.5■■□□□ 1.03
SIRPB1O00241 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIRPB1O00241 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIRPB1O00241 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIRPB1O00241 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.49■■□□□ 1.03
SIRPB1O00241 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIRPB1O00241 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIRPB1O00241 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.48■■□□□ 1.03
SIRPB1O00241 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIRPB1O00241 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.48■■□□□ 1.03
SIRPB1O00241 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIRPB1O00241 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIRPB1O00241 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SIRPB1O00241 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIRPB1O00241 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIRPB1O00241 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SIRPB1O00241 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SIRPB1O00241 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIRPB1O00241 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 AC044849.2-201ENST00000606596 710 ntBASIC21.46■■□□□ 1.03
SIRPB1O00241 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIRPB1O00241 AC135983.2-203ENST00000454486 1613 ntBASIC21.45■■□□□ 1.02
SIRPB1O00241 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIRPB1O00241 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.45■■□□□ 1.02
SIRPB1O00241 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.45■■□□□ 1.02
SIRPB1O00241 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.44■■□□□ 1.02
SIRPB1O00241 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIRPB1O00241 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SIRPB1O00241 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIRPB1O00241 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.44■■□□□ 1.02
SIRPB1O00241 WHAMMP2-203ENST00000563942 1603 ntBASIC21.44■■□□□ 1.02
SIRPB1O00241 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.43■■□□□ 1.02
SIRPB1O00241 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.43■■□□□ 1.02
SIRPB1O00241 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIRPB1O00241 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.42■■□□□ 1.02
SIRPB1O00241 LINC00273-201ENST00000539813 1452 ntBASIC21.42■■□□□ 1.02
SIRPB1O00241 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIRPB1O00241 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SIRPB1O00241 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SIRPB1O00241 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIRPB1O00241 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.4■■□□□ 1.02
SIRPB1O00241 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SIRPB1O00241 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
SIRPB1O00241 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SIRPB1O00241 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SIRPB1O00241 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SIRPB1O00241 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SIRPB1O00241 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.38■■□□□ 1.01
SIRPB1O00241 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SIRPB1O00241 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.38■■□□□ 1.01
SIRPB1O00241 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIRPB1O00241 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms