Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.77■■□□□ 1.72
MSANTD3-TMEFF1A0A0A6YYJ0 AC127502.1-201ENST00000399971 1502 ntBASIC25.77■■□□□ 1.72
MSANTD3-TMEFF1A0A0A6YYJ0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 AC012354.3-201ENST00000623734 483 ntBASIC25.76■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 WHAMMP2-203ENST00000563942 1603 ntBASIC25.74■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.73■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 AC135983.2-203ENST00000454486 1613 ntBASIC25.72■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.71■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
MSANTD3-TMEFF1A0A0A6YYJ0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.7■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.69■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.68■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.65■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 AC110285.7-201ENST00000624417 1536 ntBASIC25.65■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.64■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 AL033527.3-201ENST00000566366 1196 ntBASIC25.64■■□□□ 1.7
MSANTD3-TMEFF1A0A0A6YYJ0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 AC060814.1-201ENST00000554326 538 ntBASIC25.61■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 U85056.1-201ENST00000616429 682 ntBASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.6■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.58■■□□□ 1.69
MSANTD3-TMEFF1A0A0A6YYJ0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.57■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 AC148477.6-201ENST00000623746 465 ntBASIC25.57■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 AC018358.1-201ENST00000631079 1402 ntBASIC25.56■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.56■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.55■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.52■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.52■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 MIR219A2-201ENST00000608502 1504 ntBASIC25.52■■□□□ 1.68
MSANTD3-TMEFF1A0A0A6YYJ0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 AL135925.1-201ENST00000605920 1701 ntBASIC25.51■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.5■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.49■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.48■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC25.47■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MSANTD3-TMEFF1A0A0A6YYJ0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.44■■□□□ 1.66
MSANTD3-TMEFF1A0A0A6YYJ0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms